Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_0500 |
Symbol | |
ID | 7266997 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 616769 |
End bp | 618097 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643565363 |
Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
Protein accession | YP_002461875 |
Protein GI | 219847442 |
COG category | [C] Energy production and conversion |
COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000929219 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000688895 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCCTTCGC CCAACCAAAC TGCCCCACAA CCGGCAACCC GTCCACGGGT TGTCATCGTT GGCGCCGGAT TCGGCGGATT AGCCGCCGCT CGTACCCTCG CCAATGCACC GGTTGAGGTC TTGCTTATCA ACCGCACCAA CTATCACGGC TTCTGGCCGT TGCTTTACCA GGTTGCTACA GCGGGTCTTG AACCCGAATC AATTGCGTAT CCGGTACGCG CCATCTTGCG CCGCTATCGC AACGCAAACT TTCTGCTCGC CGAAGTGCAA GGTGTCGACT TTACCCGCCG CTGTGTCCAG ACCGATGTCG GCGAGATAAG CTACGATTAC CTCATCCTGG CTGCGGGCAG CACGACTAAC TTCTTTGGCA ATAATCAGAT TGCACGTTAT GCGTTGGGCA TGAAAGACCT TGACGAAGCA CAACGCCTGC GCAATCACGT CCTCCTCTGC TGTGAGCGTG CCGCAGTCGA GAGTGACCCA ACACGGCGTG CTGCGTTACT GACCTTTGCC GTTGTTGGTG GTGGGCCAAC CGGGGTCGAG CTAGCCGGTG CTTTCATCGA GCTGATTCGA CACGTCATTC GCCGCGATTA TCCGATGCTC GATACCCGAC AGGCCCGGGT CGTGCTGATC GAGGCAACCA ACCATATCCT CGCTTCATTT CCTGAGTCGC TCCAACACGC GGCCCTACAA CGCCTCCGGC AGATGGGTGT CGAGGTACGC CTCCAGACGC AAGTAGCCGA CGCTCATCAC GATGGCTTGA CCTTCCGCGA CGGCTCATTT TTGCCGGCTG CGACGGTCGT GTGGGCCACC GGCGTGCGCG GCGCACCTCT CGCCGATGCG CTCGGCGTGA CGCTCGGTCG TGGTGCGCGT GTAGTCGTGA CACCACACCT AACGCTACCG GCGGACGAGC GAGTTTTCGT AGTCGGCGAT ATGGCGTATT TGGAAGGATA CCGTCCGGGT GTTGCCTATC CAATGGTCGC ACCGGTTGCG ATCCAAATGG GTGAACAGGC CGCTCGTAAT ATTATCGCCC AGCTCAACCA TCAACCGATG CTGCCGTTTC ACTACATCGA TAAAGGGCAG ATGGCAACGA TCGGACGCAG TGCAGCCGTG CTTGATGCCT TCGGTATCCG ATTGAGCGGT TGGTTAGCTT GGGTCGGCTG GCTGTTTGTG CATCTCATAG CACTGGTCGG CTTTCGTAAT CGAGTCTTAG TATTGCTGAA TTGGGCGTAC AGCTACTTTA CCTATGACCG TGGGGTGCGC CTCATTTTTG GAGTTGGCGC TGAAAGGCAG CCCGCTGTCG TCGAATATGA TGAGGTCAAT GACCATTAA
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Protein sequence | MPSPNQTAPQ PATRPRVVIV GAGFGGLAAA RTLANAPVEV LLINRTNYHG FWPLLYQVAT AGLEPESIAY PVRAILRRYR NANFLLAEVQ GVDFTRRCVQ TDVGEISYDY LILAAGSTTN FFGNNQIARY ALGMKDLDEA QRLRNHVLLC CERAAVESDP TRRAALLTFA VVGGGPTGVE LAGAFIELIR HVIRRDYPML DTRQARVVLI EATNHILASF PESLQHAALQ RLRQMGVEVR LQTQVADAHH DGLTFRDGSF LPAATVVWAT GVRGAPLADA LGVTLGRGAR VVVTPHLTLP ADERVFVVGD MAYLEGYRPG VAYPMVAPVA IQMGEQAARN IIAQLNHQPM LPFHYIDKGQ MATIGRSAAV LDAFGIRLSG WLAWVGWLFV HLIALVGFRN RVLVLLNWAY SYFTYDRGVR LIFGVGAERQ PAVVEYDEVN DH
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