Gene Cagg_0500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0500 
Symbol 
ID7266997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp616769 
End bp618097 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content58% 
IMG OID643565363 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_002461875 
Protein GI219847442 
COG category[C] Energy production and conversion 
COG ID[COG1252] NADH dehydrogenase, FAD-containing subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000929219 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000688895 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCCTTCGC CCAACCAAAC TGCCCCACAA CCGGCAACCC GTCCACGGGT TGTCATCGTT 
GGCGCCGGAT TCGGCGGATT AGCCGCCGCT CGTACCCTCG CCAATGCACC GGTTGAGGTC
TTGCTTATCA ACCGCACCAA CTATCACGGC TTCTGGCCGT TGCTTTACCA GGTTGCTACA
GCGGGTCTTG AACCCGAATC AATTGCGTAT CCGGTACGCG CCATCTTGCG CCGCTATCGC
AACGCAAACT TTCTGCTCGC CGAAGTGCAA GGTGTCGACT TTACCCGCCG CTGTGTCCAG
ACCGATGTCG GCGAGATAAG CTACGATTAC CTCATCCTGG CTGCGGGCAG CACGACTAAC
TTCTTTGGCA ATAATCAGAT TGCACGTTAT GCGTTGGGCA TGAAAGACCT TGACGAAGCA
CAACGCCTGC GCAATCACGT CCTCCTCTGC TGTGAGCGTG CCGCAGTCGA GAGTGACCCA
ACACGGCGTG CTGCGTTACT GACCTTTGCC GTTGTTGGTG GTGGGCCAAC CGGGGTCGAG
CTAGCCGGTG CTTTCATCGA GCTGATTCGA CACGTCATTC GCCGCGATTA TCCGATGCTC
GATACCCGAC AGGCCCGGGT CGTGCTGATC GAGGCAACCA ACCATATCCT CGCTTCATTT
CCTGAGTCGC TCCAACACGC GGCCCTACAA CGCCTCCGGC AGATGGGTGT CGAGGTACGC
CTCCAGACGC AAGTAGCCGA CGCTCATCAC GATGGCTTGA CCTTCCGCGA CGGCTCATTT
TTGCCGGCTG CGACGGTCGT GTGGGCCACC GGCGTGCGCG GCGCACCTCT CGCCGATGCG
CTCGGCGTGA CGCTCGGTCG TGGTGCGCGT GTAGTCGTGA CACCACACCT AACGCTACCG
GCGGACGAGC GAGTTTTCGT AGTCGGCGAT ATGGCGTATT TGGAAGGATA CCGTCCGGGT
GTTGCCTATC CAATGGTCGC ACCGGTTGCG ATCCAAATGG GTGAACAGGC CGCTCGTAAT
ATTATCGCCC AGCTCAACCA TCAACCGATG CTGCCGTTTC ACTACATCGA TAAAGGGCAG
ATGGCAACGA TCGGACGCAG TGCAGCCGTG CTTGATGCCT TCGGTATCCG ATTGAGCGGT
TGGTTAGCTT GGGTCGGCTG GCTGTTTGTG CATCTCATAG CACTGGTCGG CTTTCGTAAT
CGAGTCTTAG TATTGCTGAA TTGGGCGTAC AGCTACTTTA CCTATGACCG TGGGGTGCGC
CTCATTTTTG GAGTTGGCGC TGAAAGGCAG CCCGCTGTCG TCGAATATGA TGAGGTCAAT
GACCATTAA
 
Protein sequence
MPSPNQTAPQ PATRPRVVIV GAGFGGLAAA RTLANAPVEV LLINRTNYHG FWPLLYQVAT 
AGLEPESIAY PVRAILRRYR NANFLLAEVQ GVDFTRRCVQ TDVGEISYDY LILAAGSTTN
FFGNNQIARY ALGMKDLDEA QRLRNHVLLC CERAAVESDP TRRAALLTFA VVGGGPTGVE
LAGAFIELIR HVIRRDYPML DTRQARVVLI EATNHILASF PESLQHAALQ RLRQMGVEVR
LQTQVADAHH DGLTFRDGSF LPAATVVWAT GVRGAPLADA LGVTLGRGAR VVVTPHLTLP
ADERVFVVGD MAYLEGYRPG VAYPMVAPVA IQMGEQAARN IIAQLNHQPM LPFHYIDKGQ
MATIGRSAAV LDAFGIRLSG WLAWVGWLFV HLIALVGFRN RVLVLLNWAY SYFTYDRGVR
LIFGVGAERQ PAVVEYDEVN DH