Gene Cagg_0474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0474 
Symbol 
ID7266642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp584572 
End bp585789 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content59% 
IMG OID643565337 
Producttetratricopeptide TPR_4 
Protein accessionYP_002461851 
Protein GI219847418 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.223886 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGCCG TTCGTCCGCA ACCATTAGGT ATCTTTGCAC TGCCCGCCGG CTACCTTATC 
TTACCACCGA GCGATGCACG TACCGCCGCC CCGGCGCTCG CGGCACTGCT CCGCGGCGCG
CGCCCCGATG AGTGGCCACC AGAATGGAAT TTTTACGCTC ACGCACTAGA CGGCGACATT
CAAGCAGCCC TCGCTGCTTT ACCGGCTTCG TCCGATCCGC TCACCCGCTA CAATCGCTAT
GTACTCGATG GTGCGCCGGC CGATGATCTG ATCCTGAGCA CCCTCTTAAC CGGTGAGCTG
GCCAGTTTAC AAGGTGTCGC TGCCTTTACG ATGGGCCATC GCAGCGAGCC ACCGCCACCG
ACAGGCACAA CCGGTGAAGT GCGCGCACTC GTTTTAATTA CCCATGCCGC TGCCGCTATT
GAATGCAACG ACATCCTCGC TGCCGATCAA GCATTCGCCG ATGCACTGGC CGCTGCCGTG
AACGTATCGC CGGTGTTGGC CGGGTATATC GCTCTGAATC GTGCTGAACT GGCAATCCAA
CACGGCGGTG AACTGTCCCT CATCACGCGC TGGCTGCAAC AAGCTCTCAA TCTGATCCCG
GCGGAAAGCG GGGCTGAACA ACGCGCTCGG GCGGCCCTCC AGTTGGGCCA ACTGCTGCAC
GAACATGCCA ATGGTCAGCG CGGCCCGCTT CAAGCCGCTG TGCGCTGTTA TCAAGAAGCA
CTCCGTTTCT ATCAGCGGGA AACATATCCG CTTGAGTTTG CGTTTATCCA AAACAATTTG
GCCTTGGCCT ATCTCGCTAT GCCGATGACC GAAGCCAGCG ACCGGTTGCG TGGTGCAATT
GCGGTACAGG CGCTGCGCGC CGCACTCAGC ATCTACGACC CTGACCGGCA TCCTCGCGAG
TGGGCCGGCG CACGTCTCAA TTTGGCTAAT GCGCTGCAAT ACGTTCATTC GGCGCACCCG
GCTGAGCATT TACTCGAAGC AGTGGCAATC TACGAAGACT TGTTGCAACG CCGTGACTCG
GCTACCGATC CGGCCGGCTA TGCACGTATT CTGGCTAATC TCGGCAACGC CCTTGCTCAT
CTCGGTATCT TCGCCGAGGC GCGCGAGCGG TTGCGGCAGG CCGAGCACCT CTTTACCCAG
ATCGGTGATG AGTCGGCAAT GATGACGGTA CGTGAACTAC TAGCGAATAT CGATCAGTAT
GAGGCAGTGC AGCACTGA
 
Protein sequence
MIAVRPQPLG IFALPAGYLI LPPSDARTAA PALAALLRGA RPDEWPPEWN FYAHALDGDI 
QAALAALPAS SDPLTRYNRY VLDGAPADDL ILSTLLTGEL ASLQGVAAFT MGHRSEPPPP
TGTTGEVRAL VLITHAAAAI ECNDILAADQ AFADALAAAV NVSPVLAGYI ALNRAELAIQ
HGGELSLITR WLQQALNLIP AESGAEQRAR AALQLGQLLH EHANGQRGPL QAAVRCYQEA
LRFYQRETYP LEFAFIQNNL ALAYLAMPMT EASDRLRGAI AVQALRAALS IYDPDRHPRE
WAGARLNLAN ALQYVHSAHP AEHLLEAVAI YEDLLQRRDS ATDPAGYARI LANLGNALAH
LGIFAEARER LRQAEHLFTQ IGDESAMMTV RELLANIDQY EAVQH