Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_0375 |
Symbol | |
ID | 7268476 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 466463 |
End bp | 467527 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643565243 |
Product | histone deacetylase superfamily |
Protein accession | YP_002461757 |
Protein GI | 219847324 |
COG category | [B] Chromatin structure and dynamics [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.239274 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATCT TTCTAAGTAG CGAACACCAT CTGCATCATC CACCGTTCGA GATTCTCGAT GGGCGAAGTG TTGCCTATTT TGAGACACCT CAGCGCATAT CAATCATCCT GACTGCACTG GCAACTGCTG GCTTTCCGCA ACCAATTGCC GTCGCACCGG CGACGCTCGC CGATTTGCAG ACGGTACATA CAGCCGATTA TCTTGAGTAT CTTGCCCACG CCTTTGAACG GTGGCAAGCC GCCGGTTTGT CCGCACCGGT CTTGCCGTCG GCATGGCCCT TACCCGGTTT ACGCATGCGT AGCGATTGCC CACAAGCCGC GGCGGGACGC TACACCTTTG ATCTGAGCGC ACCGATCATG GAGGGAACCT TTGCCGCAGC CTGCTCGGCT GCCGGTGCTG CTTTGGCCGG AGCAGAGGCA CTCTTGCAAG GCGAACGATT CGCATACGCG CTCTGTCGTC CACCCGGCCA TCATGCTGCG GCAAATATGG CCGGTGGTTA TTGTTTCTTG AACAATGCTG CGCTTGCTGC CGACCGATTG GCACGCAGTC AAACCGGTGG TGATGCGACA TGGGCTTTGC GCGCACCAAC GGTGGCGGTG CTTGACATTG ATTATCATCA CGGCAACGGT ACGCAGAGTA TCTTCTATGC ACGTAATGAT GTGTTGACCG TATCGTTGCA CGCCGACCCG TCCTACGAGT ACCCGTACTA CCTTGGCTAT GCCGATGAGC GGGGGACAGG AGCCGGTGAG GGGTATAATC TCAATGTTCC GCTGCCGTCT GGGATCGATG ATCGCCAATA TCTGGTAGCG CTCGACCAGG CCTTGCAAGC AATTGCCGAT TATGGTCCGC ACTACCTTGT TGTCTCGGCT GGCTTCGACA CCTTCCACGC CGATCCACTT GGTCGTTTTG CCCTCACAAC GGCAGCCTAC CGGTCAATTG GTGTGGCAAT TGCCCAGCTC GGTTTACCGA CCCTTTTTGT TCAAGAGGGC GGTTATGCCA TCGAAGCCCT CGGTACGAAT GTAGTTACTT TACTAACCGG AGCTATAACA TATGTTGCCG GATAA
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Protein sequence | MKIFLSSEHH LHHPPFEILD GRSVAYFETP QRISIILTAL ATAGFPQPIA VAPATLADLQ TVHTADYLEY LAHAFERWQA AGLSAPVLPS AWPLPGLRMR SDCPQAAAGR YTFDLSAPIM EGTFAAACSA AGAALAGAEA LLQGERFAYA LCRPPGHHAA ANMAGGYCFL NNAALAADRL ARSQTGGDAT WALRAPTVAV LDIDYHHGNG TQSIFYARND VLTVSLHADP SYEYPYYLGY ADERGTGAGE GYNLNVPLPS GIDDRQYLVA LDQALQAIAD YGPHYLVVSA GFDTFHADPL GRFALTTAAY RSIGVAIAQL GLPTLFVQEG GYAIEALGTN VVTLLTGAIT YVAG
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