Gene Cagg_0314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0314 
Symbol 
ID7267495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp392744 
End bp395329 
Gene Length2586 bp 
Protein Length861 aa 
Translation table11 
GC content58% 
IMG OID643565182 
ProductATP-dependent chaperone ClpB 
Protein accessionYP_002461696 
Protein GI219847263 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0542] ATPases with chaperone activity, ATP-binding subunit 
TIGRFAM ID[TIGR03346] ATP-dependent chaperone ClpB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.174502 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.43861 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTTCA ATACCAATCG GTTTACGGAA AAATCGTATG AAGCGATCGC AGCAGCGCAG 
GCAGCGGCGG AACGGCTCGG TAATGCCGAA GTCCAACCCG AACACCTGCT CTATGCACTG
CTCGATCAAA GTGACGGCGT TGTGCCAAAG GTGCTGGCCA AGCTGAACCT GCCGGTCGGT
GCGATTAAGC AACAGATTAA TAACGAAATT GCACGATTTC CACGCATAAC GAGTGGCAGT
GTCCAAGTGC AGCTTGGTTC GCGCTTGCGC ACGGTGCTGG TTAAAGCCCA CGACGAGCTA
GCTCAATTCG GTGACGAATA TGTCAGCACC GAACATTTGC TGTTGGCCAT TCTCGACCAT
GCCGGTGGTG CGGCTGAGCG TGTCCTCAAG CAGGCCGGTC TCACACGCGA TAAGCTGTTG
ATGGCCCTGC GCGAGGTACG TGGTGCGCAA CGGGTAACCA GCCCTAATCC AGAAGGGACG
TATGCGGCCC TTGAGCAGTA CGGACGCGAC CTGACCGAGC TGGCGGCACG CAACAAGCTC
GATCCGGTGA TCGGGCGTGA TGAAGAGATT CGGCGCGTGA TCCAGATTTT GTCGCGCCGT
ACTAAGAACA ACCCGGTGCT GATCGGTGAG CCGGGCGTCG GTAAGACAGC AATTGTTGAG
GGACTGGCTC AACGCATTGT GCGCGGTGAC GTTCCCGAGT CGCTCAAGAA CAAGCGGGTA
ATCGCGCTTG ATCTCGGTGC TTTGATCGCG GGTGCGAAAT ATCGCGGCGA GTTTGAAGAG
CGATTGAAAG CCGTGCTCAA AGAGATTCAA GAGCGCGACG ATGTCATTCT GTTTGTCGAT
GAGCTACATA CCGTCGTCGG GGCCGGCGCT GCCGAAGGCG CTATGGATGC CGGTAATATG
CTCAAACCGA TGTTGGCACG CGGTGAGTTG CATATGGTCG GCGCAACCAC CCTCGACGAG
TATCGCAAGC ATATCGAGAA GGATGCGGCC CTTGAACGAC GGTTCCAGCC GGTGATGGTT
GATCCGCCAT CGGTCGAAGA CACCATCTCG ATCCTGCGCG GTCTCAAGGA GCGTTACGAG
ACGCACCACG GCGTGCGCAT TACTGATGGT GCGATCATTG CCGCAGCGAT GCTCTCGGAT
CGCTACATCT CCGACCGCTT TTTACCCGAC AAGGCAATCG ACCTGATCGA CGAAGCGGCG
GCCCGTCTGC GCATGGAGAT TACCTCCGAT CCGCAAGAGC TTGACGATCT GAAGCGGCGG
ATCATGCAGT TGGAGATCGA GCGGGAAGCG TTGCGCAAAG AGAAGGATCA GGCCAGCAAG
GAGCGACTTG AGAAGCTTGA GCAAGAGTTA GCCAATCTGC GCGAACAGCG GTCGGCGCTG
GAAGCTCAGA TCCAGCGTGA ACGGCAAGAG CTGGAGCGCA TCCAGCAATT GAAGGAGAAG
ATCGAACAGA CCCGCGCCGC TATCGAACAG GCGCAACGCC AGTACGATTA CAACAAGGCG
GCTGAATTGC AATACGGCAC GCTTGTCAGC CTCGAACGTG AGTTACAAGC GGCAGAGGCT
GCGTTAGGCG GACAAAATCG TCTGCTGCGG CAAGAGGTCA CCGAGACCGA CATCGCCGAA
ATTATCTCGA AGTGGACCGG TATCCCGGTG ACCAAGCTGC TCGAAGGCGA ACTTGAGAAG
CTGGTACACA TGGAAGAGCG CTTGCACCAG CGCGTTGTCG GCCAAGACGA GGCAGTTACT
GCTGTCGCTA ATGCGGTACG CCGTGCCCGT GCCGGTTTGC AAGACCCGAA CCGACCGTTG
GGCAGTTTCC TCTTCCTTGG TCCGACCGGT GTCGGTAAGA CCGAGCTGGC CCGTGCGCTG
GCCGAGTTCC TCTTTGATGA CGAGCAGGCG ATGGTGCGGA TCGACATGTC GGAGTACATG
GAGAAGCACT CGGTCGCCCG CTTGATCGGT GCGCCGCCCG GCTATGTCGG CTATGATGAG
GGTGGTCAGT TGACCGAGGC GGTACGGCGT AAACCGTACA GTGTTGTGCT ATTCGATGAG
ATCGAGAAGG CGCATCCCGA TGTCTTCAAT GTCTTGCTGC AAGTGCTTGA TGATGGCCGG
TTGACCGATG GACAAGGTCG AGTGGTCAAT TTTAAGAACA CGGTCATCAT TATGACAAGC
AATATCGCCA GCGCGACTAT TCAAGAGCTG GCACGGGCCG GAGCGCCGCA AGGCGAGATT
CGGGCTGCGG TGATGGAAGA GCTGCGCAGT GTATTGCGGC CTGAGTTCTT AAACCGGATT
GATGAAGTCA TCGTCTTCTC GCCACTCAGC CGCGAACACA TCGATCAGAT CGTCGAGATC
CAGCTCAACC GGCTACGCAA GTTGTTGGCC GACCGCAAGC TCAACTTGAC GTTGACCGAC
GCCGCCCGTG CCCAGTTGGC TGCCGAAGGT TACGATCCGG TCTACGGTGC GCGTCCGCTC
AAGCGGGTGA TCCAGCAACG CATCCAGAAC CCGCTGGCGT TGCAACTGTT GCAAGGCGCG
TTCCCGGAAG GCAGCACGAT CATCGTCGAT GTTGAAAACG GCAACTTCGT CTTCCGGCGC
GGTTGA
 
Protein sequence
MSFNTNRFTE KSYEAIAAAQ AAAERLGNAE VQPEHLLYAL LDQSDGVVPK VLAKLNLPVG 
AIKQQINNEI ARFPRITSGS VQVQLGSRLR TVLVKAHDEL AQFGDEYVST EHLLLAILDH
AGGAAERVLK QAGLTRDKLL MALREVRGAQ RVTSPNPEGT YAALEQYGRD LTELAARNKL
DPVIGRDEEI RRVIQILSRR TKNNPVLIGE PGVGKTAIVE GLAQRIVRGD VPESLKNKRV
IALDLGALIA GAKYRGEFEE RLKAVLKEIQ ERDDVILFVD ELHTVVGAGA AEGAMDAGNM
LKPMLARGEL HMVGATTLDE YRKHIEKDAA LERRFQPVMV DPPSVEDTIS ILRGLKERYE
THHGVRITDG AIIAAAMLSD RYISDRFLPD KAIDLIDEAA ARLRMEITSD PQELDDLKRR
IMQLEIEREA LRKEKDQASK ERLEKLEQEL ANLREQRSAL EAQIQRERQE LERIQQLKEK
IEQTRAAIEQ AQRQYDYNKA AELQYGTLVS LERELQAAEA ALGGQNRLLR QEVTETDIAE
IISKWTGIPV TKLLEGELEK LVHMEERLHQ RVVGQDEAVT AVANAVRRAR AGLQDPNRPL
GSFLFLGPTG VGKTELARAL AEFLFDDEQA MVRIDMSEYM EKHSVARLIG APPGYVGYDE
GGQLTEAVRR KPYSVVLFDE IEKAHPDVFN VLLQVLDDGR LTDGQGRVVN FKNTVIIMTS
NIASATIQEL ARAGAPQGEI RAAVMEELRS VLRPEFLNRI DEVIVFSPLS REHIDQIVEI
QLNRLRKLLA DRKLNLTLTD AARAQLAAEG YDPVYGARPL KRVIQQRIQN PLALQLLQGA
FPEGSTIIVD VENGNFVFRR G