Gene Cagg_0279 details

Gene Information

• Locus tag: Cagg_0279
• Symbol: nrdR
• ID: 7267460
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chloroflexus aggregans DSM 9485
• Kingdom: Bacteria
• Replicon accession: NC_011831
• Strand: +
• Start bp: 351139
• End bp: 351663
• Gene Length: 525 bp
• Protein Length: 174 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 643565149
• Product: transcriptional regulator NrdR
• Protein accession: YP_002461663
• Protein GI: 219847230
• COG category: [K] Transcription
• COG ID: [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains
• TIGRFAM ID: [TIGR00244] transcriptional regulator NrdR

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.00520187
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: 19
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCGGTGCC CAATTTGCCA CTTTCCAGAG ACCGATGTGA TCGATACCCG TAAGCTGTAT 
GAGGGCGAGG TGATCCGTCG CCGGCGAAAA TGCCGCGCCT GCGGACGACG GTTTACTACC 
TACGAGCGGA TCGAATCGGT TAGTCTGATG GTTGTCAAAA AGGACGGCAC CCGCGAACCG 
TATGATCGCG AGAAGATCGC CCGCGGTGTG CGCACCGCCT GTTACCGTCG CCCTGTTTCG 
GCTGATGCGA TCGAGCAATT GGTCAATGAA GTAGAAACGG CAGTGATGGC AACCGATCAG 
CAAGAAATTA GCTCGCAATT CATCGGCGAT GCGGTGATGC GCCGATTACG CGATCTCGAT 
GAAGTGGCTT ATATCCGGTT TGCGTCGGTG TATCGCTCGT TCGCCGATAT CGGTAAGCTC 
CGGGAAGCAG TTGACGAATT GTTAGAACGC GAAGGTACCC GGAACGGTCA TTCATCGGCT 
GCCACCACCG ATCAGGGCAC CACCGATAAC CACAGCCGTA TGTAA 

 

Protein sequence

MRCPICHFPE TDVIDTRKLY EGEVIRRRRK CRACGRRFTT YERIESVSLM VVKKDGTREP 
YDREKIARGV RTACYRRPVS ADAIEQLVNE VETAVMATDQ QEISSQFIGD AVMRRLRDLD 
EVAYIRFASV YRSFADIGKL REAVDELLER EGTRNGHSSA ATTDQGTTDN HSRM