| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_0257 |
|---|
| Symbol | |
|---|
| ID | 7267437 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | + |
|---|
| Start bp | 324836 |
|---|
| End bp | 326860 |
|---|
| Gene Length | 2025 bp |
|---|
| Protein Length | 674 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643565126 |
|---|
| Product | sodium/hydrogen exchanger |
|---|
| Protein accession | YP_002461641 |
|---|
| Protein GI | 219847208 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0569] K+ transport systems, NAD-binding component
[COG4651] Kef-type K+ transport system, predicted NAD-binding component |
|---|
| TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0120325 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.149917 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATGTTG AAGACATATC ATTGTTGGCA AATTTGACCA TTGCCCTCGT AACTGCTTTT
GCCGGCGGCA TTATTGCGCG TCGGATCGGG CTGCCGACCA CTGTCGGCTA CCTATTGGCC
GGTATGGTGA TTGGCCCATT TACGCCGGGA TTCGTCGGCG ATGTAGCGGA TCTCAGCCAG
CTCGCCGAAA TCGGTGTGAT CTTTTTGATG TTCGGCGTCG GTCTGCACTT TTCGTTACAC
GATCTGTGGG CCGTGCGGCG CGTGGCCTTA CCGGGAGCGA TCTTGCAAAT GGTGATCGCC
ACCGGTCTAG GGTTTATCCT CAGTCGCTAT TGGGGTTGGG AACCGCTATC AGGGCTGCTC
CTGGGCTTAT CAATCTCGAT TGCCAGTACC GTTGTCTTGA TGCGCGGGTT AATGGATAAC
GGCCTCTTGA GTACCGGCGC CGGACGGATC GCTGTTGGTT GGCTGGTGAT GGAGGACATC
GCTACCGTGT TTATTCTCGT GTTGCTGCCG ATCATCTTTG GCGGGCAAAG CGCACAATCG
CCATGGTCGG CTCTTGTTTC GCTGCTCAAG GTGGCCGTGT TCATCGTCGT GATGTTGTTT
GCCGGGCGTA AATTGTTGCC AAAATTGCTC GACGTGATCG CCGGTACCCG TTCACGCGAA
CTGTTTATTC TCGCTGCGGT GGCAATAGCA CTCGGTACCG CTTTCGGTGC GGCGACATTT
TTCGATGTTT CTTTGGCGTT GGGCGCGTTT CTTGCCGGGG TAGTGTTGAA AGAATCGCAA
TTTAGTCATC AGATCGGTGA TGATGTGCTG CCTTTTCGGG AAACGTTTGC CGTGATCTTT
TTTGTTTCGG TAGGGATGAT TGTTAATCCG CTCTACCTCT GGGCAAATGC CGGACAGGTA
ATCATGCTAA CAACCCTGAT TGTCGTCGGT AAAGCTCTCA TTACCCAACT ACTTGGCTTT
TTCTTACCGG CCAGTGGGCG AACGATGCTG ATCGTTGCAG CCGGTCTTAG TCAGATCGGC
GAGTTTTCGT TTATTTTGGG ACAGGCGGGA ATACGGCTCG ACATCCTCAA TCAAGAACAG
TACTCACTGA TTTTGGCCGG GTCACTGCTA TCAATTATGC TAAATCCGTT GATGTTCCGC
GCCATCAAAC CGGTTGAGCA CGTGATGCAA CGTCTCTCGC CACGCTTGTG GGAGCGGTTT
GATCGTCATC CATTACAGCC CGCCGATATT GCCTTACCAC GTGAGGGACA CGTAGTTGTG
GTTGGGTATG GCCGGGTCGG CCAGCATATC GTGAATGTGC TCGAACGGTT AGGGGTGCCG
CGGTTGGTGA TCGAAATCGA TTCGGGACGA GCAGCCGAAT TTAATGCCCG GGGAGTACCT
ACCCTCTTCG GCGACGCGGC TAATTCCGAT GTGCTGATGC ATGCCGGTCT CGAGCGGGCA
CGTGCGCTCG TCGTTACCTT ACCCGACGAG ACGGCGACCG AGATGGTGGT GGCTGCGGCA
CGTAACATTG CCCCGAACCT CCCGATCATC GCGCGTGCGG CAACCACAAA AGGGGTCGGT
CGGTTGCTGA AGCTCGGTGC GCACGACGTG ATTCACCCCG AACTCGAAGG GGGATTGGAG
GTGATGCGCC ATACATTGCT CTGCCTGGGC TATCCGGCGA CACAGGTGCA AGGCTATACC
GATGCAGTGC GTCGTGATGA ATATGATACT ACCGTTTCGT CACCGGCAGA GCATCAGGCC
CTTGATCAGA TGGTGCGGGC TGCCCGCGGG ATTGAGATTG CGTGGCGGCT GGTGAGCGAG
CATAGCCCGA TCATCGGGCA AACACTGGCC GAAGCGAACA TCCGTGCCCG TACCGGCGCC
TCGGTGATTG CGCTGATCCG TAACCAACAG TTGATCGCCA ATCCAAAGTC AAGCACCGTA
TTCCAGGCCG GCGACCTCCT CGGCTTAATC GGTGAAAGCG AGCAAATCGC TGCCGCCGAA
CAACTGATTT GTGGTACACC GGAACTGGTC GGTGTACCGG AGTAA
|
|---|
| Protein sequence | MHVEDISLLA NLTIALVTAF AGGIIARRIG LPTTVGYLLA GMVIGPFTPG FVGDVADLSQ
LAEIGVIFLM FGVGLHFSLH DLWAVRRVAL PGAILQMVIA TGLGFILSRY WGWEPLSGLL
LGLSISIAST VVLMRGLMDN GLLSTGAGRI AVGWLVMEDI ATVFILVLLP IIFGGQSAQS
PWSALVSLLK VAVFIVVMLF AGRKLLPKLL DVIAGTRSRE LFILAAVAIA LGTAFGAATF
FDVSLALGAF LAGVVLKESQ FSHQIGDDVL PFRETFAVIF FVSVGMIVNP LYLWANAGQV
IMLTTLIVVG KALITQLLGF FLPASGRTML IVAAGLSQIG EFSFILGQAG IRLDILNQEQ
YSLILAGSLL SIMLNPLMFR AIKPVEHVMQ RLSPRLWERF DRHPLQPADI ALPREGHVVV
VGYGRVGQHI VNVLERLGVP RLVIEIDSGR AAEFNARGVP TLFGDAANSD VLMHAGLERA
RALVVTLPDE TATEMVVAAA RNIAPNLPII ARAATTKGVG RLLKLGAHDV IHPELEGGLE
VMRHTLLCLG YPATQVQGYT DAVRRDEYDT TVSSPAEHQA LDQMVRAARG IEIAWRLVSE
HSPIIGQTLA EANIRARTGA SVIALIRNQQ LIANPKSSTV FQAGDLLGLI GESEQIAAAE
QLICGTPELV GVPE
|
|---|
| |