Gene Cagg_0256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0256 
Symbol 
ID7267436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp323564 
End bp324568 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content56% 
IMG OID643565125 
Productglycosyl transferase family 2 
Protein accessionYP_002461640 
Protein GI219847207 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0188043 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.110004 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGCTA TTATTATCGT TTCGTGGAAT GTCAAAGAGT TGCTGCGCAG GTGTTTGCAG 
GCCGTCTATG CATCATTGGC AACCGCCCAT CTGGACGCCG AGATTATTGT CGTTGACAAC
CATAGTGATG ACAATACACC GGCAATGGTG CGCCGTGAGT TTCCAGATGT TCATCTGATC
GAGGCGGGCG CTAACCTCGG TTTCGCTGCC GGTAACAATC TGGCACTCCG TCTGCTGCTA
TCCCGACCAG ATGGTGGCCC GGAGTTTGTC CTTTTGCTCA ACCCTGATAC CGAACCGGTA
GCCGATGCCA TTCCACGCTT AGTCGCCTTT CTGCAAATGC ACCCGGCAGC AATTGCGGTT
GGCCCACAGC TCCGTTACAG CGACCATCGT GTGCAGTCCT CGCGACGCCG ATTTCCTACG
CCGCTAACGA TGATCTGGGA GAGTACACCA TGGGAACGTC TATGGCCATC GAATCCGTGG
GCGTGGTTCT ACCATTGCGC CGACCGGCCC GACAATCTTG TCCAGCGCGT GGGTTGGTTG
GTCGGAGCAG CGTTGCTGGT GCGGACGACG GCTATCCGTA AGGCTGGTCT GCTCGATGAG
CGATTTTTTA TGTATAGTGA AGAGGTCGAG TGGCAATGGC GTTTACAACA GGGCTCGGCC
ATCGCACCCC CACCAAACCG TTCACAGCTT GAGCGCGTCG AAGTCAGTAG TCAGATTTGG
TATTTGCCCG ACGCCGTGAT TATCCATCAC GAAGGCAAAA GTAGCGAACA GGTGTTGGTT
GGGCGCCATC GGCACTTTCA ACAGAGCCGC TTACGGTTGG CCCGCATGTG GTACGGGTGG
CTCGTAGCAA TCGTGCTCCA CCGCTTGATT TGCGCCGGCT ACCGGTACGA GTTAATCATT
GAGACGCTCA AATTGGCTCT TGGTCACCGC CCTGAATTGC GCCGCCAACG GATCGAAACC
TATCGGCAGG TGTTGCTTGC GCTGGCCCAG GCTGATGCGT ATTAA
 
Protein sequence
MLAIIIVSWN VKELLRRCLQ AVYASLATAH LDAEIIVVDN HSDDNTPAMV RREFPDVHLI 
EAGANLGFAA GNNLALRLLL SRPDGGPEFV LLLNPDTEPV ADAIPRLVAF LQMHPAAIAV
GPQLRYSDHR VQSSRRRFPT PLTMIWESTP WERLWPSNPW AWFYHCADRP DNLVQRVGWL
VGAALLVRTT AIRKAGLLDE RFFMYSEEVE WQWRLQQGSA IAPPPNRSQL ERVEVSSQIW
YLPDAVIIHH EGKSSEQVLV GRHRHFQQSR LRLARMWYGW LVAIVLHRLI CAGYRYELII
ETLKLALGHR PELRRQRIET YRQVLLALAQ ADAY