Gene Cagg_0242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0242 
Symbol 
ID7267504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp304423 
End bp304839 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content56% 
IMG OID643565111 
Productprotein of unknown function DUF55 
Protein accessionYP_002461626 
Protein GI219847193 
COG category[S] Function unknown 
COG ID[COG2947] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0087907 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAACT ACTGGTTGCT CAAGACTGAG CCATCGGTCT ATAGCTTTGC CGATCTGGTA 
CGGGAAGGTA GGACGGTGTG GGATGGTGTT GAAAACACGG TCGCACTCAA ACATCTGCGT
GCGATACGTC AGGGCGACGT AGCACTGATT TACCATACCG GTGATGAACG CCAAGCAGTT
GGGTTGGCAC AGATCGTCAG TGACCCGTAC CCCGATCCCA AACAGCACGA TCCTCGCTTG
GTTGTGGTTG ATGTTGTGCC GCTCCAGCCG CTCAACCGTC CGGTGACCCT CGCCGCCATC
AAGGCCGATC CTTTTTTCGC CGATTTTGCG CTCGTGCGTC AGGGACGATT GTCAGTAGTA
CCGGTGACGT CTGCCCAATG GGAACGGTTG TTGGTGATGG CTGAAACCGC TCTGTGA
 
Protein sequence
MPNYWLLKTE PSVYSFADLV REGRTVWDGV ENTVALKHLR AIRQGDVALI YHTGDERQAV 
GLAQIVSDPY PDPKQHDPRL VVVDVVPLQP LNRPVTLAAI KADPFFADFA LVRQGRLSVV
PVTSAQWERL LVMAETAL