Gene Cagg_0198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0198 
Symbol 
ID7269112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp248004 
End bp248753 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content53% 
IMG OID643565068 
Producthypothetical protein 
Protein accessionYP_002461583 
Protein GI219847150 
COG category[S] Function unknown 
COG ID[COG5522] Predicted integral membrane protein 
TIGRFAM ID[TIGR02206] conserved hypothetical integral membrane protein TIGR02206 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.485643 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGATA TCTTTAGCTT GTACTGGGAG GGACCACCGT TTGTGCTCTT TAGTGTACCG 
CACTGGATTG CACTTGGATG TGTCGTTGCC GCCGCAGTTT GGGTGCTCGG TCCGGCACGT
CATTTATCGC CGATGGCCGC ACGGTGGTGG CGCTATGGGT TAGCCGCTGT GCTCACGATC
AATGAACTCG CCTACAACGT TTGGTTTTGG GTCCATGGCC TCTGGTCAAT CCAGTACATG
TTGCCGCTGC ACCTATGTAC GTTGTTTACG TGGCTGAGCG TCATCATGCT CCTGACCCGG
AGCTATCGCA TATTCGAGTT TGCCTACTTT ATGGGTATCG GTGGGGCCGT GCAAGCTTTG
CTGACGCCTG ATATTGGCAT ATACGGCTTT CCTCATTTTC GTGCCTTCCA GAGTTTTATT
TCCCACGGTG GCATTGTGTT GGCTGCGTTG ACGATGATCG CGTTAGAACA GTATCGCCCC
ACGTGGGGAT CGGTGGGGCG AGTGATCGTC GGAGCCAATC TGCTTATGGC AATAGTGGGC
ATGATCAATT GGCTGCTCGA TAGTAATTAC CTCTTTTTGG CCCGCAAGCC ATACACGCCC
AGTTTGCTTG ATTTCCTAGG ACCGTGGCCG ATCTATATTG TGTGGATGGA GATAATCGGT
ATTATCACGA TTCTCGTGCT GTATGCACCA TTTGCCTTAG CCGACCTGCG TCAGAGGTCG
CCGATCACGG CAAGCAGAGT ACGACGATAG
 
Protein sequence
MADIFSLYWE GPPFVLFSVP HWIALGCVVA AAVWVLGPAR HLSPMAARWW RYGLAAVLTI 
NELAYNVWFW VHGLWSIQYM LPLHLCTLFT WLSVIMLLTR SYRIFEFAYF MGIGGAVQAL
LTPDIGIYGF PHFRAFQSFI SHGGIVLAAL TMIALEQYRP TWGSVGRVIV GANLLMAIVG
MINWLLDSNY LFLARKPYTP SLLDFLGPWP IYIVWMEIIG IITILVLYAP FALADLRQRS
PITASRVRR