Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_0154 |
Symbol | |
ID | 7266893 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 204504 |
End bp | 205559 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643565026 |
Product | TIM-barrel protein, nifR3 family |
Protein accession | YP_002461541 |
Protein GI | 219847108 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0042] tRNA-dihydrouridine synthase |
TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.386223 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0859714 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGATC AAATAACCTT CACCGAAATT GCGCAGCTCC CAACAGCGTA CCATGTTGCG TACATCAAAA TAGAACCGAA TATCGTTCTG GCCCCGATGG CCGGCGTCAC CGACAGCATC TTCCGCCGCA TGATATTGCG GTTGGGTGGG TGTGGTTTGG TGAGTACAGA GATGACCAAC GCTGCGAGCG TCAGTCCAAA AGCATTGCGC CGCCATCGCT TGCTCGACTA CCTACCAGAA GAACGACCGT TGACGATGCA GATTTCGGGC AACGATCCCG ATCTCGTAGC GAATGCAGCA CGGGTCGTCG AGCAATTAGG GGCCGATATT ATCGATATTA ACTGCGGTTG TCCGTCCCCG AAAGTCACCG GTGGCGGGCA TGGTTCGGCG TTGCTGCGTG ATCTGCCGAA GATGGAACGA CTCTTGCGAG CAGTGCGGGC TGCCGTCCAG ATTCCGGTGA CGCTCAAGCT GCGTGCCGGC TGGGACGAAG CGAGCCTCAA TTTTATTGAA GCCGGCCAGC GCGCCGAAGC TGCCGGCGTC GCTGCACTAA CGCTACATCC GCGTACCCGT GAGCAAGGGT ACAAAGGGCA AGCCGATTGG TCACGAGTGG CAGCGCTCAA GCGTGCCGTC TCAATCCCGG TGATCGGGAG TGGTGATGTC GTCACCGCGC AAGATGCGCT CATCCGATTA CGCGATAGTG GCGCCGATGG CGTGATGATC GGACGCGGCG CAATCGCTAA TCCGTGGATT TTCCGCCAAG TCGCCGATCT GCGTCAAGGC CGCACACCGT TTGAGCCAAC TCCTGCCGAT AAGTACCATC TCTTGCTGGA GTACATGGCG ATCTACGCCG AAGAATTACC CGAACGGTTG GCGCTCAATA AGATCAAACA ACTGATCGGT CAGTTTTACA TCGGCTTACC CGGCAGTAAC CATCTGCGTG TCGCCGTTCA TACTTCCACC AGTCTTGCCG CAGCGCAAGA AGCAATTGAG CGATTCTTCG CACCGTATCT CGAAACAGAT GCAGCGGTGC CTGAACCGGC AATTGCCGCC GATTAG
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Protein sequence | MSDQITFTEI AQLPTAYHVA YIKIEPNIVL APMAGVTDSI FRRMILRLGG CGLVSTEMTN AASVSPKALR RHRLLDYLPE ERPLTMQISG NDPDLVANAA RVVEQLGADI IDINCGCPSP KVTGGGHGSA LLRDLPKMER LLRAVRAAVQ IPVTLKLRAG WDEASLNFIE AGQRAEAAGV AALTLHPRTR EQGYKGQADW SRVAALKRAV SIPVIGSGDV VTAQDALIRL RDSGADGVMI GRGAIANPWI FRQVADLRQG RTPFEPTPAD KYHLLLEYMA IYAEELPERL ALNKIKQLIG QFYIGLPGSN HLRVAVHTST SLAAAQEAIE RFFAPYLETD AAVPEPAIAA D
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