Gene Cagg_0119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0119 
Symbol 
ID7266857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp164862 
End bp165848 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content54% 
IMG OID643564991 
ProductUDP-glucose 4-epimerase 
Protein accessionYP_002461507 
Protein GI219847074 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1087] UDP-glucose 4-epimerase 
TIGRFAM ID[TIGR01179] UDP-glucose-4-epimerase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.500269 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00370533 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGATTT TAGTTACCGG CGGTGCCGGC TACATCGGGA GTATCACCAG CGCCGAACTG 
ATCCGAGCCG GTCATGAAGT GATTGTGATC GATAATCTGT ATCAAGGTCA TCGGGCGGCT
GTGCCCCCAG AAGCCGTCTT CATCGAAGCT GATTTGGCCG ACCGTAAAAC GCTGAGCGAG
ATCTTTGCCG CCTACCCCGG TATCGACGGC ATTATGCATT TCGCCTCGTA CACGCTGGTC
GGCGAGAGTA TGGAGAAGCC ATTTCTCTAT CTACGGGATA ATCTGACGAA TGCAGCAAAT
CTGCTTGAGG CTGCCATTGC TGCCGGTGTC CGTCGGTTTA TCCTTTCGTC TACGGCCAAT
CTGTTCGATC GGCCAGAACG TATTCCCATT GCCGAGCACG AACGGATCGT GCCCGGTTCG
CCTTACGGTG AGTCGAAGTT TTTCATCGAG CGCACGTTAC ACTGGATGGC CCGTATTTAT
GGCATGCGCT ACGCTTGTTT GCGTTACTTC AACGCTTGTG GCGATACTCC TGATCGAGGT
GAAGATCACG ACCCCGAAAC CCACCTGATC CCGATTGTGT TGCAAGTTGC ACTTGGTCAG
CGTCCGCACG TTACTATCTT TGGCGACGAT TATCCGACCC GTGATGGTAC GTGTGTTCGC
GACTATATCC ACGTGCTCGA CTTGGCGAGT GCCCACATTT TGGCAATGGA AGCGCTCGAC
CGTCTGGGTG AGCGTCGCTA TAACTTGGGG AATGGTCAAG GGTTTACGGT ACGTGAGGTG
ATTGAGACTG CACGTAAAGT GACCGGCCAT CCGATTCCGG CAGTGGTTGG TCCGCGTCGG
CCCGGCGATC CGGCAGTGTT GGTTGCTTCA TCAGACACAA TACGGGCTGA ACTAGGTTGG
CAACCACAGT ATCCTGACCT TGAGACGATC ATTGCCTCGG CTTGGGAATG GCATCGGACG
CATCCATATG GCTATGACGA TAAATAA
 
Protein sequence
MKILVTGGAG YIGSITSAEL IRAGHEVIVI DNLYQGHRAA VPPEAVFIEA DLADRKTLSE 
IFAAYPGIDG IMHFASYTLV GESMEKPFLY LRDNLTNAAN LLEAAIAAGV RRFILSSTAN
LFDRPERIPI AEHERIVPGS PYGESKFFIE RTLHWMARIY GMRYACLRYF NACGDTPDRG
EDHDPETHLI PIVLQVALGQ RPHVTIFGDD YPTRDGTCVR DYIHVLDLAS AHILAMEALD
RLGERRYNLG NGQGFTVREV IETARKVTGH PIPAVVGPRR PGDPAVLVAS SDTIRAELGW
QPQYPDLETI IASAWEWHRT HPYGYDDK