| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_0102 |
|---|
| Symbol | |
|---|
| ID | 7266840 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | - |
|---|
| Start bp | 144424 |
|---|
| End bp | 146715 |
|---|
| Gene Length | 2292 bp |
|---|
| Protein Length | 763 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643564974 |
|---|
| Product | multi-sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_002461490 |
|---|
| Protein GI | 219847057 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGCAA TTCCCTTCAT GATGATTTAT CTGATTCCGG CCATTGTCGC AGCCGTGTTG
GCGGTTTTTA TGTGGCAACG CCGTTACTAT CGTGGTGGAA GACCTTTTAC CCTGTTACTG
ATCGCCATTG CTTGGTGGAA TCTCTGTCAC GCGCTCAGTA TCATAGACAC TACCTTTGAA
GGGACACTCT TCTGGTCGTT GTTGCAGAAT TTAGGGATTG TGCTGATCGG GCCGTGTTGG
CTCTTAATCG CACTCGCCTA TTCCGGTGAG TGGTGGCGTG TGCCGCGCTG GTTGCGACGA
GGTATCTTTG TCCCTGAGTT CGTCGCGCTG ATTTTTGCCT TGACCAACAA TCTCCACAAC
CTTTGGTGGT CGACGGTTGT AGCCGACACA TCGCGACCCT TTCTGTGGTT GTCGGTCACC
CGTGGCCCCG CCTTTTGGGC GCATAGTGTG TACGCTTATG TCTGTCTGGC GGTTGGGATT
ATTGTGCTGA TCCGCTCGTC CTGGCAAGCA CCGCCGATCC ACCGTCTTCA CTCACGGCTG
ATGCTCGTCG CTGCGCTCAT TCCTGCGGTG GGTAACATTG CGTTTCTTAG CGGCGTTCGC
GTCCCATGGA ATGATGACCC CACACCTATT TTACTTTTGA TTTCGGCGGC CCTTGGGATT
TATACCACTG TGCGTTACCA CCTCTTCGAT TTGGCACCGC TGGCCGAACA AGAGGTGATT
GCCAGTTTAC CGGATGGTCT GATTATTCTG GATAGTCGCG GGCTAATTGT TGAGATCAAT
CAACACGCAC CACGTCTGCT TGGCATCGAG AAAGAACGCT GGATCGGTCG ATCACTTGCC
CACCTGGTAC GCAATTCACC ATTTGGTAAC GATCTGCAAC ACATTCTACA AGCCAACCCT
TCGAGTGCAA ATCGACCATC CATCCTCGAT AATGGAACGC GGGCTATTGA AGTTCGTTTC
CGCCCACTGC AATCGGCTAC CGGCATTGCA ACCGGTTCAT TACTGTTGAT CCGTGATGTG
AGCGAGCGGA TGCGGGCAGA ACAGGAGCGA TCTCGCCACA TTGCTGCTCT ACGCCTGATC
AATGCGATTG CCCGCAGTGC AAATACTGCC CAAGAGACCA ATTCACTGCT CAACACGATT
GCGCGCATTA TCGTGCAGGA AGGCCACTGG GAACGTGTAT CGATTGGCTT GATCGATGAA
ACAAAGCAGC ACATTACGGT AGCAGTGGAC TACACCGTGA GCGGTCCCGG TCGCTTGCAA
GGCGAGGTGA TTACCGGTTT GCCTGCCGCA CAGTTGATTA AACGTATTCG ACAGGGACGA
CCCGAACTCA TCCAACTCAG CGAACTTGAT ACCGATGATC CACTGGCTGC CGGGTTGCAT
CGAGAGGGTT TGCAATCACT CTTAGTGGCA CCACTCCGCC ACGATCATCA AGCTACCGGT
ATCCTTGGTT TTGCCGGCCA TGAGCCAAAA ACGATGACGC CGGCGCTGAG CGAACTTGTC
ACTGCGATCG GCGAACTGAT TACCGATGCG ATTATTCGCA TTCGCCTGTA CGAACAGGTG
CAGCACGCCG ACCGGCTCAA GACAACGTTT CTCGCTACGG TAAGCCACGA GCTACGCACG
CCACTGACTT CGATCATCGG GTACACCGAT GTGTTACGCC GCGGCATCTT AGGCGAACTT
AGCCCTGAGG TACAAGAGAC CTTGGGGTAT ATGCGGCAAG CTAGCCTGAA CCTGATGCGA
CAAATCAACG ATATTCTTGA GTTTTCACGG ATCGAGGCCG GTCAACTGTC GATCGAGATT
GAACCGGTTG AGGTGGGTGC CATTATCCAG AATGTAGTCG GGCAGATGTT ACCCCAAGCG
CGCGAACGTG ACTTGACCGT AAACGTCACC ATTCCGCCCG ATATACCTCA GATCGCAGCC
AATATTGGTC GGTTGGAGCA AGTACTGATC AATCTGCTGA GCAACGCGAT CAAGTTCAAC
CGTCCGCAAG GCTGGATCGA GATCAGTGTC GAACCGCGTG GAGCGTGGCT GCGTATTAAT
GTCAAGGATT CTGGGGTCGG AATTGCACCG GAGGATCAAG AACGAATCTT TGCCGAGTTT
CAGCGTGCTC GCTCACCGAA TGGAGAACGC GTGCATGGCG TTGGTCTCGG CTTGGCCATT
TGCCGCCGCC TGATCACCCA CATGGGTGGA ACTATCGGCG TAACAAGTAC ACCGGGTGAA
GGTTCCGTCT TCTATTGTGA TTTGCCGGTG ATAAACGTTG AGCAGATGGT AGGAAAACGA
GCCGACGCAT GA
|
|---|
| Protein sequence | MAAIPFMMIY LIPAIVAAVL AVFMWQRRYY RGGRPFTLLL IAIAWWNLCH ALSIIDTTFE
GTLFWSLLQN LGIVLIGPCW LLIALAYSGE WWRVPRWLRR GIFVPEFVAL IFALTNNLHN
LWWSTVVADT SRPFLWLSVT RGPAFWAHSV YAYVCLAVGI IVLIRSSWQA PPIHRLHSRL
MLVAALIPAV GNIAFLSGVR VPWNDDPTPI LLLISAALGI YTTVRYHLFD LAPLAEQEVI
ASLPDGLIIL DSRGLIVEIN QHAPRLLGIE KERWIGRSLA HLVRNSPFGN DLQHILQANP
SSANRPSILD NGTRAIEVRF RPLQSATGIA TGSLLLIRDV SERMRAEQER SRHIAALRLI
NAIARSANTA QETNSLLNTI ARIIVQEGHW ERVSIGLIDE TKQHITVAVD YTVSGPGRLQ
GEVITGLPAA QLIKRIRQGR PELIQLSELD TDDPLAAGLH REGLQSLLVA PLRHDHQATG
ILGFAGHEPK TMTPALSELV TAIGELITDA IIRIRLYEQV QHADRLKTTF LATVSHELRT
PLTSIIGYTD VLRRGILGEL SPEVQETLGY MRQASLNLMR QINDILEFSR IEAGQLSIEI
EPVEVGAIIQ NVVGQMLPQA RERDLTVNVT IPPDIPQIAA NIGRLEQVLI NLLSNAIKFN
RPQGWIEISV EPRGAWLRIN VKDSGVGIAP EDQERIFAEF QRARSPNGER VHGVGLGLAI
CRRLITHMGG TIGVTSTPGE GSVFYCDLPV INVEQMVGKR ADA
|
|---|
| |