Gene Cagg_0091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0091 
Symbol 
ID7266829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp129378 
End bp131927 
Gene Length2550 bp 
Protein Length849 aa 
Translation table11 
GC content57% 
IMG OID643564964 
Productglycosyltransferase 36 
Protein accessionYP_002461480 
Protein GI219847047 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3459] Cellobiose phosphorylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00140222 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGTT ACACTCTCCG TCTTGACAAG CAAAAAAGTA GTGATAGAAT AAGCGCATCG 
AGAGCAGTTA CGCTTTATCG GCAGGGTTCG TTTGTTGTTT ATATTTGTGA AACGTTTCAT
CCACGTAATA CCCAAGCTAT CCTGATCGTC TACGCAAACC GGAGTGTTAT GAGACGTCTA
TTTTCTAGCC GTTATGGCTA CTTTAGTGCA GATGGCCGCG AATATACCAT CACTACACCG
CTGACACCGC GCCCATGGGG TAATGTGATC AGCAACGGTG ACTACGCAAT GATAGTATCG
CAAACCGGTT CGGGCTATAG CTGGCGTAAC AACGCCGGTC AGAATCGGAT TACCCGCTCG
TTTCAAGATT TAGTGCAAGA CAACTGGGGG AAATACCTCT ATCTGCGCGA TCTCGATAGT
GGGCATTATT GGTCGGCAAC TTACAAACCA ACTCTCCATA CGTATGACCA CTACCAGGTC
ACTCACGGCC TCGGTTATTC GCGTTTTGAG CAGGAAGTAC ATGGCATTCG TAGCCAGTTG
ACCGTCTTTG TCGCACCCTA TGACCCGGTT GAGTTTTTTG AACTGACGCT CACCAATTGC
ACCGATCTTG TGCGCCGGCT CGATATAACC ACGTATGTTG AATGGCTTCT AGGGTTTGCA
CCCGACGAGC ACCGTGAGTT TCACAAGCTG TTTATTGAGA CTACGGTTGA TCGGTCGCTC
AATGCGCTAT TAGCGCGTAA ATATTTGTGG GGGTTTGCCG ACGAAGCGGG CCGGCACAAC
AACCTCGATT GGCCATACGT GGCATTTATG GCGGCGAGTG AACCGCTCAA GAGTTTCGAC
GGCGATAAAG AGTCGTTTAT TGGCCTGTAC CAGAGTCTTG AGCATCCGCA GGCGATGCGG
ATGGCAACGT TAGCCGAACG CACCGGTCGC TTTGGTGACG CAATTGCCGC GTTGCAAGTG
GAAGTGACGC TGGAACCGGG GGTCAGTCAT ACGATTGTCT TTACGTTGGG TGCTGCTGAG
CAGGGACGTG AAGACCCCGC CGAGTTAATC CGCCGCTTGA CTTCACCGGC AGCGAGTGCG
CAAACATTGG CGGCAGTACA TACCTTTTGG TCACGACTGG TTGATGCCGA ACATGTGGAA
ACGCCTGATC CGGCGCTCAA TCTGATGACC AACTACTGGC TGAAGTATCA GGCGATTTCA
GGCCGGTTGT GGGCGAAATC GGCGTTTTAT CAAGTCTCGG CCGGATACGG CTTTCGCGAT
CAGTTGCAAG ACAGCCAAAT CTTTTTGGTG TGCGATCCTG AATTGACCAA ACGCCAGATT
TTGCTCCACG CTGGCCAGCA ATTTATCGAG GGCGATGTGC TGCACTGGTG GTTTTCGATC
CGCGGTGGTG GCCCACGCAC GAACTGTTCG GACGATCTGC TCTGGCTGCC GTTTATCGTT
GATTCGTACC TGCAAGAGAC CAACGATGTC GCAATTCTGG ATGAGCCAGT GCCGTACCTC
AACGGCCCGG CGGAGCCGCT CTACCTGCAT TGCAAGCGGG CGATCGAGCG CGCGTTCAGC
CGATTTTCGC CCCGCGGCAT CCCGCTGATG GGTGATCACG ATTGGAACGA TGGCCTTAAT
GCGGTTGGCA CTCATCTGCG CGGCGAGAGT TTTTGGGTGG CTGAGTTTCT CTACGCGATC
CTTGAGCGCT GGATGCCGCT GGCGCAGCAG CGCGGTGATG AGGCGTTCGC CGAACGCTGC
GCGGCGGTGC GCGAGACGCT GCGTTGGGCG ACGAACCGCT ACGGCTGGGA TGGCGCGTGG
TTTTTGCAGG CGACGACCGA TGATGGCTTG CCGCTCGGAT CGCATGCGAA TGATGAGGGC
CGCATCTTTT TGATGCCGAA TATTTGGGCG GTGATTAGCG GCATTGCCGA TCGCGAACGA
GCCTGGCAGG CGATGGAGTC GGTTTCGCGC CACCTGCTCT GCGAGTATGG CACGTTGCTC
AACTATCCCG CCTTTACCCG CCCCCGTCCT GACATCGGTT ATGTCACCCG CTATGCACCG
GGCTTGCGTG AGAACGGCGG CGTCTATACC CACGCGGCCA CGTGGTCGGT GTGGGCCTAC
GCCCTGCTCG GCGATGCCGA GCAAGCTTAT GAAGCCTATC GCCGTATCTG CCCGCCCAAC
CGCAGCGCCG ACCCAGATCG CTACAAAGCC GAACCTTACG TCACGCCGGG CAACGTTGAC
GGCCCGCAAT CGCCGTATTT CGGGCGCGGC GGCTGGACGT GGTACACCGG TTCGGCCCAG
TGGCTGCACC GGATGGCGAC CCATTGGATT TTGGGAATTA GGCCGCAGGC CAATGGCTTG
CTGATCGATC CGCTGATCCC GGCGACATGG GATCGGTTCA CCGTGCGCCG TTCGTTCCGT
GGTGCGGTAT ACGAGATCGA GGTGCTCAAC CCGCAGCACG TAAGCCGGGG TGTGGCGACG
GTAGAGGTGG ACGGCCAGCC GCTCGCTGGC AACGTCGTGC CGGTCTTCGC CGATGGCCAG
ACCCACCGGG TGCGGGTGGT CTTGGGGTAA
 
Protein sequence
MKRYTLRLDK QKSSDRISAS RAVTLYRQGS FVVYICETFH PRNTQAILIV YANRSVMRRL 
FSSRYGYFSA DGREYTITTP LTPRPWGNVI SNGDYAMIVS QTGSGYSWRN NAGQNRITRS
FQDLVQDNWG KYLYLRDLDS GHYWSATYKP TLHTYDHYQV THGLGYSRFE QEVHGIRSQL
TVFVAPYDPV EFFELTLTNC TDLVRRLDIT TYVEWLLGFA PDEHREFHKL FIETTVDRSL
NALLARKYLW GFADEAGRHN NLDWPYVAFM AASEPLKSFD GDKESFIGLY QSLEHPQAMR
MATLAERTGR FGDAIAALQV EVTLEPGVSH TIVFTLGAAE QGREDPAELI RRLTSPAASA
QTLAAVHTFW SRLVDAEHVE TPDPALNLMT NYWLKYQAIS GRLWAKSAFY QVSAGYGFRD
QLQDSQIFLV CDPELTKRQI LLHAGQQFIE GDVLHWWFSI RGGGPRTNCS DDLLWLPFIV
DSYLQETNDV AILDEPVPYL NGPAEPLYLH CKRAIERAFS RFSPRGIPLM GDHDWNDGLN
AVGTHLRGES FWVAEFLYAI LERWMPLAQQ RGDEAFAERC AAVRETLRWA TNRYGWDGAW
FLQATTDDGL PLGSHANDEG RIFLMPNIWA VISGIADRER AWQAMESVSR HLLCEYGTLL
NYPAFTRPRP DIGYVTRYAP GLRENGGVYT HAATWSVWAY ALLGDAEQAY EAYRRICPPN
RSADPDRYKA EPYVTPGNVD GPQSPYFGRG GWTWYTGSAQ WLHRMATHWI LGIRPQANGL
LIDPLIPATW DRFTVRRSFR GAVYEIEVLN PQHVSRGVAT VEVDGQPLAG NVVPVFADGQ
THRVRVVLG