| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_0076 |
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| Symbol | |
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| ID | 7269073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chloroflexus aggregans DSM 9485 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011831 |
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| Strand | - |
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| Start bp | 104847 |
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| End bp | 106724 |
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| Gene Length | 1878 bp |
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| Protein Length | 625 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643564949 |
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| Product | sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_002461465 |
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| Protein GI | 219847032 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCTTC CATCCCTTCC GCCTATCCAA CGCTCATGGA TGCGCTGCCA GGCTCGCGGT
CTTGATCCGG CAACCCCACC CCAAACGGGA CCGGTGAATA TAGCGGCTTG GAGCCACCTT
CAGACCCTCG CTCGCTCGTC GATTGAAGAT CTGTACCAAT TAAGTGAACA CCCCGGTTTT
GCCGTAGTAA TCTGCGATGA ACAGGCTACC ATCATTGATG TTGCCGGCGA TAGCACGATT
CTTAGTCTCG CGCAACAATC TGGCATTGGA TACGGTATTA GTCTGCTCGA AGAAGTAGCC
GGCACCAATG CCGTTGATTT AGCGTTGCGC GAGGCACTAC CCTACCAGAC GAGTGGTGAT
GAGCATTATT GCAATTGGTT GCAGCCGTTT AGTTTGGCGG CGGCACCAAT ATTCAGCCCA
GATGGCCGAG CGCTCGGAGC ACTGGCGATT CTTACTCGTG CCGAGATGCA ACACCCCTAT
GCCCTAGGGA TGGTTATTGC CGCAGCCCAG GCGTTGCACA ACCAGCTTCG TGCTGAACGA
TTACTCAACG AAGCGAATGA TCAACTGAGT GAACTCTACG CGACCCTCGA TAGTATTAAT
GAAGGGTTGA TCTTTGTCGG TCCTAACGGT GAGATTCGCC GTTTGAGCCG GCGCGTCGCC
TCCATCCTCG ATATTAATGT GCGTTCGGCA GCCGGTCGCC CGTTAGTAAG TGTTATTCCA
CCACCTCCGG CGATCAGTAC TGCACTGCAA GAACTTACCA CCCTCGATGA ACAGGAAGTG
ATCTGGCAGA CACGCTCTGG CCCACAAGCG GTGATGTGTA GCGTCCGACC GGTATGGGAT
CGGAGCCGAC GGTATCTAGG CAGTGTGATT ACGTTACGTC CGGCGGAAAG TGTGCGTCAA
TTGGTGCAAC AGGTTGTTGG TGCTCGTGCT ACCTTTACGT TTCGTGACAT TATTGGTCAG
AGTGAGGCAA TGCGGCAAGC GTTACGCCAG GCACGGCTGG CCGCAGCCGG TCGTGGTCCG
GTACTCCTTC GTGGCGAAGG CGGGGTAGGC AAAGAGATTT TCGCACAGGC TATCCATAAC
GCAAGTAACC GCGCCGGTGG GCCATTTGTG CGCGTCGCTT GTGCTGCCAT TCCCCGCCAA
TTGCTCGATA GCGAGCTGTT TGGCGTTGAA AGCTCTGAAC ACCAAGCCGG TCGGCCGGGA
AAGCTCGAAT TGGCTCATGG CGGGGTACTG TACCTCGAAG CCATCGATGC GCTCTCGTTC
GATCAACAGA CGAATCTGCT CCGCGCAATC GAGATGGGGC GTGTGATCCG GTCGGGGGGA
AAGCGTCCGA TCCCTATCGA TGTGCGCCTC ATTGTGACCG GCCACGATCT TGAACAGCTT
GTGCAAGAAG GCCGGTTTCG GGCCGATCTC TACGCACGAC TCAGCGCCTT TACTATCGAT
ATCCCACCAC TGCGCCGGCG CGGTGACGAC GTGCTGTTAC TGGCCAACCA TATGGTGCAG
CGCCTCAGCG AACAGCTCGG TCGCCCGATC GCACTCGCTC CTGATGCACT CGCCGCACTT
CACTCCTATC CATGGCCGGG AAATGTCCGT GAATTGGAGG TTGTCCTCGA ACAAACGGTG
CAAACGACGG CTAAGAGTGT ATTGACCGTT CACGATCTGC CACCGGCAAT TGCCCGGCAT
ACGACACCAC TGGCAATGGC CGATAACCCA CGCCTTGCTG AGGCCCATGC TCTTAGTGAA
CGCGACGCAA TTGTACGGGC AGTACGTAGT GCCGGCGGAC GGCTGAGCCG AGCTGCTACC
CTACTTGGGA TTAGCCGGGC AACCCTCTGG CGCAAGATTA CTCGCTATCA GATTTCACGT
GACGAATTAC GAGCCTGA
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| Protein sequence | MALPSLPPIQ RSWMRCQARG LDPATPPQTG PVNIAAWSHL QTLARSSIED LYQLSEHPGF
AVVICDEQAT IIDVAGDSTI LSLAQQSGIG YGISLLEEVA GTNAVDLALR EALPYQTSGD
EHYCNWLQPF SLAAAPIFSP DGRALGALAI LTRAEMQHPY ALGMVIAAAQ ALHNQLRAER
LLNEANDQLS ELYATLDSIN EGLIFVGPNG EIRRLSRRVA SILDINVRSA AGRPLVSVIP
PPPAISTALQ ELTTLDEQEV IWQTRSGPQA VMCSVRPVWD RSRRYLGSVI TLRPAESVRQ
LVQQVVGARA TFTFRDIIGQ SEAMRQALRQ ARLAAAGRGP VLLRGEGGVG KEIFAQAIHN
ASNRAGGPFV RVACAAIPRQ LLDSELFGVE SSEHQAGRPG KLELAHGGVL YLEAIDALSF
DQQTNLLRAI EMGRVIRSGG KRPIPIDVRL IVTGHDLEQL VQEGRFRADL YARLSAFTID
IPPLRRRGDD VLLLANHMVQ RLSEQLGRPI ALAPDALAAL HSYPWPGNVR ELEVVLEQTV
QTTAKSVLTV HDLPPAIARH TTPLAMADNP RLAEAHALSE RDAIVRAVRS AGGRLSRAAT
LLGISRATLW RKITRYQISR DELRA
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