| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_0058 |
|---|
| Symbol | |
|---|
| ID | 7269055 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | + |
|---|
| Start bp | 83015 |
|---|
| End bp | 85747 |
|---|
| Gene Length | 2733 bp |
|---|
| Protein Length | 910 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643564931 |
|---|
| Product | Phosphoenolpyruvate carboxylase |
|---|
| Protein accession | YP_002461447 |
|---|
| Protein GI | 219847014 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2352] Phosphoenolpyruvate carboxylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.424552 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACCAC TCGATCATGC TAAAGCTGAG CAGGATTTTC ACTTTTTGCT GACATGCTTT
CAGCGTATGC TCCGTGATAT TGGTGCGATC TCGGTTGCAG CAGCATTGCC ATGGTTGCAT
GAGGGAACCG ATCAGTCGGC AGTAGCAGTA AGGGAATTGG CGCAGGCATT TGGGATTGCC
TTCCAGTTGC TCAACATTGC CGAAGAGAAT GCGGCAGTCC AGCAGCGCCG GATGACCGAC
CGTGATCCCT CATTGCCGCC CGAATCGGGT CGTTGGCGTG ATGCGTTGTT GAAATTACAG
CGTGCTGGCT TCACGGCTGA TGAGATTGCG GCGGCGTTGC CTGAAATACG AGTTGAACCG
GTGCTAACCG CCCATCCAAC CGAGGCAAAA CGCACTACCG TCCTCGATCA TTACCGCGAG
CTGTATCTGT TGCTCGTCCG ACGTGAAAGC CAACGTTGGT CTCCGGCAGA GCAAGCCGAG
ATCGAGACCG ATATTATAGC GTTGTTAGAG CGGTTGTGGC GGACCGGTAA CATCTTTCTT
AGTAAACCGG ATGTAGCTTC AGAGGTACGA AATGTCCTGC ACTACCTTGT GAACGTTTTT
CCTGACGTAT TGCCGGTCCT GGATAATCAA TTGCGCTATG CGTGGCAAAT GAGCGGATTT
GATCCGACAT TACTGACCGA GCGTTGGCCA AAGCTAACGT TTGGTTCGTG GGTCGGTGGC
GACCGCGATG GGCATCCGCT GGTCACGGCC GAGATTACGG CGCAGACGTT ACACGAGTTA
CGGTTGCAGG CCTTGCGCTT ACTCCGGCGT CGGATTCGGC AGGCGGTGCG TCATCTGAGT
ATCTCGGATC TGCTGGTACC AACCCCGCCC GGTCTGGCCG AGCAGATTCG GCGGATGACG
AATGCCTTGG GGATGCGAGG GGTACAAGCG GTGGCGCGGA ATCCGAACGA GCCATGGCGG
CAGGCGTTAC ATCTGATGCT GGCGCGCCTA CCGATCGATG ATGCACCGGC GGAAGCAGCG
CGTTTGGTTG ATGAACCGGG ACGGTATCGT AATGCAGATG AACTGCTGCA CGATTTACAA
GAATTTGCGC AGTATTTACG GGAGGTTGGT TGTGGGCGCC TGGCCGACGC AGAAGTGCGG
CCATTGATGT ACTTGGTGCA GACGTTTGGC TTTCATCTCG CTACCCTTGA TATCCGGCAG
AACAGCCAGT TTCACGATCG GGCGTTGGCT CAACTGTTGA AGGTTGCCGC CTTACCGACC
GATGATCTCT TGGGTGGTGA TCCTGAACGG CGACGAGCAT TGTTAGAAAG AGAAATCGTT
TCACCGCGTC CGTTTGCCCA TCCCGATACA CCGCTCGATC CAGAAGCAGC GGCAGTGGTC
GGTTGTTATC GGGTGTTGGC TTCTCATATT GCTCGCTACG GTACGAGTGG TCTTGGCCCG
CTGATCATCA GCATGACACG TGATGTGACG GATGTACTGG TGGTGTACTT GCTGGCGCGT
GAAGCCGGGT TGGCCTATGC AACGCCAGAG GGGTTGGTTT GTCGGTTACC GGTTGTACCT
CTGTTTGAAA CCATCGAAGA TCTCGAACAC AGTCCGCAGA TTTTAGCCGA GATTCTCGAT
CATCCGGTGA CCCGTCGTAG TTTACGGGCA CAGTCTCAGA ATGGTGAGCT GGTCCAGCAG
GTGATGATCG GGTATAGCGA TAGCAATAAA GATGGCGGGA TTCTCGCCAG TCAGTGGGCG
TTGCAACGAG CACAACGTGC TATGAGCGAG GTCGGGGCGG CACGCGGAGT ACGGATTCGC
TTTTTCCACG GACGTGGAGG AACGATAAGT CGCGGTGCGG GGCCAACCAA TCGGTTTATT
GCGATGCTGC CACCGGGCAG TTTGAACGGC GATTTGCGCT TGACCGAACA GGGTGAAGTC
ATTGCCCAAA AATACGCTAA CCGTCTGACT GCTGCCTATA ATCTCGAATT ATTGTTGGCC
GGAACGACGA CACATACGCT GTTACATCGG CGCCATCCAC CTCTACCACA TCCGCTTGAG
CCGGTGATGG AACGGTTGGT GCAACAGGCG CGGGCAGCAT ACCGTAATTT GATCGAGCGT
GATGGTTTTA TCACCTTTTT TCGACAAGCC ACGCCTATTG ATGTGATCGA GCAAAGTCGG
ATTGGTTCAC GTCCGGCACG ACGCACGGGG CAAGCGACGC TTGCCGATCT GCGGGCGATT
CCTTGGGTGT TTAGCTGGAA CCAGTCGCGC TTCTATTTGC CGGGTTGGTA TGGGGTGGGG
AGTGCGCTGC ACGCTTTGCG CGATACCGAT CCGGCAGTGT GGGAAGAGCT TTGTGCTGCC
CAGTGGAATT GGCCGTTCTT GAGCTATCTC CTGGCAAATG TGAGTACGAG TCTCCTGACT
GCTCATCGTC CGACCATGCA CGCCTATGCG TCATTAGTCG AAGATGAGGT GCTGCGGCGA
GACTTTCTGA CCTTGATCGA TGCCGAGTTT GAACGTACTG TAGCGGCACT GGAAGCTATC
TTTGGCATGC CACTTGACCG ACGGTGGCCC CAACTTGCTG AGACGCTCGC CCGTCGCCAG
ATCGGGCTGG CACCGTTGCA CCAGCAGCAG ATCGAGTTAC TCCGGCAATG GCGCGCCCAG
CGAGCGGCTG ATGATCCGGC GGCGGAAACA ACGCTCATCG ATCTGTTGCT GCTGGTCAAT
GCTATTGCTG CCGGATTACG CACCACGGGG TGA
|
|---|
| Protein sequence | MQPLDHAKAE QDFHFLLTCF QRMLRDIGAI SVAAALPWLH EGTDQSAVAV RELAQAFGIA
FQLLNIAEEN AAVQQRRMTD RDPSLPPESG RWRDALLKLQ RAGFTADEIA AALPEIRVEP
VLTAHPTEAK RTTVLDHYRE LYLLLVRRES QRWSPAEQAE IETDIIALLE RLWRTGNIFL
SKPDVASEVR NVLHYLVNVF PDVLPVLDNQ LRYAWQMSGF DPTLLTERWP KLTFGSWVGG
DRDGHPLVTA EITAQTLHEL RLQALRLLRR RIRQAVRHLS ISDLLVPTPP GLAEQIRRMT
NALGMRGVQA VARNPNEPWR QALHLMLARL PIDDAPAEAA RLVDEPGRYR NADELLHDLQ
EFAQYLREVG CGRLADAEVR PLMYLVQTFG FHLATLDIRQ NSQFHDRALA QLLKVAALPT
DDLLGGDPER RRALLEREIV SPRPFAHPDT PLDPEAAAVV GCYRVLASHI ARYGTSGLGP
LIISMTRDVT DVLVVYLLAR EAGLAYATPE GLVCRLPVVP LFETIEDLEH SPQILAEILD
HPVTRRSLRA QSQNGELVQQ VMIGYSDSNK DGGILASQWA LQRAQRAMSE VGAARGVRIR
FFHGRGGTIS RGAGPTNRFI AMLPPGSLNG DLRLTEQGEV IAQKYANRLT AAYNLELLLA
GTTTHTLLHR RHPPLPHPLE PVMERLVQQA RAAYRNLIER DGFITFFRQA TPIDVIEQSR
IGSRPARRTG QATLADLRAI PWVFSWNQSR FYLPGWYGVG SALHALRDTD PAVWEELCAA
QWNWPFLSYL LANVSTSLLT AHRPTMHAYA SLVEDEVLRR DFLTLIDAEF ERTVAALEAI
FGMPLDRRWP QLAETLARRQ IGLAPLHQQQ IELLRQWRAQ RAADDPAAET TLIDLLLLVN
AIAAGLRTTG
|
|---|
| |