Gene Cagg_0043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0043 
Symbol 
ID7269040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp64886 
End bp66121 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content58% 
IMG OID643564916 
Productthreonine dehydratase 
Protein accessionYP_002461432 
Protein GI219846999 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1171] Threonine dehydratase 
TIGRFAM ID[TIGR01127] threonine dehydratase, medium form
[TIGR01124] threonine ammonia-lyase, biosynthetic, long form 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGGT TTGCTATCGA ACTCGCCGAT ATTCAAGCTG CCCGGCGTGC CTTGCGCTCG 
ATAATTTTGC CGACGCCGGT ACTGCCTGCT ACCCGACTCA GCGCGGAGCT AGGCGGGCCG
ATCTTTTACA AAGCTGAGAA TACCCAACAG AGTGGTTCAT TTAAGATTCG GGGCGCGTAT
AACACCATCG TTCATCTTTC ACCCGAAGAA AAGGCGCGTG GCGTGATCGC ACCCTCCGCC
GGGAACCATG CCCAAGGTGT TGCCCAGGCT GCACAATTAC TCGGCGTAAA AGCAACGATT
GTTATGCCCG AACGTGCTCC GTTGACCAAA GTGGTTGCCA CCCGTCGGCT CGGCGCCGAA
GTCATCCTAC ACGGTGCGAC GTTTGATGAT GCAGTTGCTT ACGCTCATAC TTTGAAGGAA
GAACGAGGTC TGACGTATGT CCATGCGTTT GATCATCCGC GTGTGATTGC CGGTCAAGGA
ACTATCGGGC TGGAATTGGT TGAAGCCCTC CCCGATCTGC AACAACTCAT CGTTCCGATT
GGGGGTGGTG GTTTGATCGG CGGCATTGCC CTCGCCGTCA AGACCTTGCT CCCGCACGTC
CGTATCGTTG GTGTACAAGC CGCCGGTTGC GCACCGGTGC CGGCATCACT CGCTGCCGGC
CATCCGGTTA CGGTACCTAC CGCACACACG ATTGCCGACG GTATCGCCGT TAAGCGTCCC
GGAGAACTAA CCTTACCGAT GATTCAAGCA CTCGTCGATG AGGTGGTCAC CGTCGATGAT
GAAGAGATTG TGATGGCGAT AGCCCACGTC TTGCAATATA GCCGGCTAGT GGTTGAGGGT
GCCGGTGCAG CCGGTGTGGC AGCACTGCTC AGTGGGAAGG TGCCGGTCCA ACCGAATCAG
GTCACCGCGA CCATTCTCTG CGGTGGGAAT ATCGACGCCA ACCTGCTCAT GCGCGTGATC
GAATATGCGC TGGTGCGACA GGGGCGCTAC CTCCTCCTCC GTACCAGTGT CGACGACCGA
CCGGGTGGAT TAGCAGCGCT CGTCAATCAC GTTGCCTCGA CCGGTGCGAG TGTAATGGAC
CTGTTCCATC GCCGGGGGAT GTGGCGAGTG CCGATTGACC GTGCCGGTGT CGAGTTGATC
CTTGAGGTGC GCGATGAGGA GCATACCCAA GCAGTGATCG ATTCCCTGGA ACGGGCCGGG
TTCCATTGTG AACGCGAATC GAATTGGCCG TTGTGA
 
Protein sequence
MNRFAIELAD IQAARRALRS IILPTPVLPA TRLSAELGGP IFYKAENTQQ SGSFKIRGAY 
NTIVHLSPEE KARGVIAPSA GNHAQGVAQA AQLLGVKATI VMPERAPLTK VVATRRLGAE
VILHGATFDD AVAYAHTLKE ERGLTYVHAF DHPRVIAGQG TIGLELVEAL PDLQQLIVPI
GGGGLIGGIA LAVKTLLPHV RIVGVQAAGC APVPASLAAG HPVTVPTAHT IADGIAVKRP
GELTLPMIQA LVDEVVTVDD EEIVMAIAHV LQYSRLVVEG AGAAGVAALL SGKVPVQPNQ
VTATILCGGN IDANLLMRVI EYALVRQGRY LLLRTSVDDR PGGLAALVNH VASTGASVMD
LFHRRGMWRV PIDRAGVELI LEVRDEEHTQ AVIDSLERAG FHCERESNWP L