Gene Cagg_0030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0030 
Symbol 
ID7269027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp46933 
End bp47646 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content56% 
IMG OID643564903 
Productisochorismatase hydrolase 
Protein accessionYP_002461419 
Protein GI219846986 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCAA TTCACGATCT GGCAACGCGC AGTGTATCTT TCCTACACTA TCTGGAGCAG 
TGGTATCGCA ATCTGCCGCA AGTTGAGTTG GCAACCATTG TCGGCGATGC CCCTGAACGG
GTGGCTCTCT GCTCGATTGA TATGATCAAC GGTTTCTGTA AAGAGGGACC GTTAGCCGGG
CCACGAGTCG GTGCGCTGGT CGAGCCGGTT GTGCAGCTCT TCAACCGCGC CTACGCGCTC
GGAGTACGCG CTTTTGTGCT GACGCAAGAC ACCCACGATC CGGCAACACC GGAATTTGCC
TCATACCCAC CGCACTGCGT TGCCGGCACC GCCGAGAGTC AGACGATCCG TGAACTTGCC
GAGTTACCGT TTGCCGATCA GATTACCGTC ATCGAGAAGA ACTCGCTTAG TTCACACATC
GGCACACGGT TCGGGGCATG GTTGTCTGAG CATCCCCAGA TCGATACCTT CGTGCTGGTT
GGTGATTGCA CCGATCTCTG CGTGTACACG GCGGCAATGC ATTTGCGCCT GGAGGCGAAT
GCGCTTAACC TCAAGCGGCG TGTGATCGTT GCCGCTAATG CCGTTGATAC CTTCGACACG
CCGGTAACGG TCGCACGCGA GTTGGGTATT TATGCGCACG ATGGCGATCT GCATCACGTC
ATGTTTTTGC ACCACATGGC CCAAAATGGG GTTGAGGTCA TGAATATCGT GTAG
 
Protein sequence
MPAIHDLATR SVSFLHYLEQ WYRNLPQVEL ATIVGDAPER VALCSIDMIN GFCKEGPLAG 
PRVGALVEPV VQLFNRAYAL GVRAFVLTQD THDPATPEFA SYPPHCVAGT AESQTIRELA
ELPFADQITV IEKNSLSSHI GTRFGAWLSE HPQIDTFVLV GDCTDLCVYT AAMHLRLEAN
ALNLKRRVIV AANAVDTFDT PVTVARELGI YAHDGDLHHV MFLHHMAQNG VEVMNIV