Gene Cagg_0028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0028 
Symbol 
ID7269025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp43993 
End bp45264 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content54% 
IMG OID643564901 
Productpeptidase M16 domain protein 
Protein accessionYP_002461417 
Protein GI219846984 
COG category[R] General function prediction only 
COG ID[COG0612] Predicted Zn-dependent peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATACT TGCACACAAC TCGTAACGGC ATTCGTATTT TAGTCGAGGA ATTACCCCAT 
ACGCACTCAA TAGCGATTGG CTGTTTTATC GACATCGGTG CGCGCTATGA AACAGCCGAG
ATTGCCGGTG CGGCTCATTT TATCGAACAT ATGCTGTTTA AAGGCACCGG CGCCTACCCA
ACTGCCCACG CGATCTCGCT GGCAATTGAA GGGGTGGGTG GTTATTTGAA CGCCTCTACC
GGCTATGAGA CCACGGCATT TTATGCGAAG GTTGCTGCTA TTCACTTCAA CCGTGCATTG
CATGTGTTGA GCGAAATGGT ACAACGACCG CTGTTTGAAG CTCATGAACT GGAAAAAGAA
CGACGGGTCA TCATCGAAGA GATCCGTGGG ATTCAAGATA ACCCTACCGA ACTCGTGCAT
GAGTTGTTGC AACAGACGAT GTGGGGCGAT CACCCGTTTG GTCGCGATAT TGCCGGGCGA
ATCGATACCG TTAGTGCAAT TGCTCGCCAC GAGCTGTTAC AGTTTTTTGC CCAAGGCTAT
CATGCCGGTA CGCTGGTGAT CTCGGTTGCC GGTAATATCA GGGCCGAACA GGCGATCCCG
GCTATCGAGC AAGCATTTGC CGATGTACCG GCCGGTCAGC GCCCAATTGC CCTCCCTGCA
CCTTCCTTAC CCATCGAACA CCGCCTCAAT CTCTTGCCAC GTGATATCGA ACAGGGCAAC
TTCTGCCTCG GTCTCCCCGG TGTATCCTAT CACGACCCCG ATCGGCGTGC GGTGCAGGCC
CTTGATGCGC TTCTCGGTGG TGGGATGTCG TCGCGATTGT TTCAGACGAT TCGTGAAGAG
CACGGTTTGA GCTACAACAT CGGTTCCTAT CACAACGAGT TTGCCGATAC CGGTATGTGG
GTAATCTATG CCGGGGTCGA ACCTGATGCG TTACGTGATG CCGTCGCAAT GACGCGAGCT
ATCATCCGCG ATGTGGTTGA GCACGGTCCT ACCGATCAAG AACTCACAAC CGTGAAGGAG
CAGCTTAAAG GGAGTTTGTT GCTCTCGCTC GAGGATACCT GGGCTATCGC CTCACGAAAC
GCAACCAGCC TGCTCCGCTA CCAAACAGTG CCATCGGTTG AACAGATTAT CGCCGAGATC
GATGCCTTGA CCCTTGCCGA TCTCCAGCGC GCCGCGCATC GTTTACTATC CACCAATCAA
CAATGGTTGG CAGTGGTTGG CCCATACGCC GAGGATGACG AGGCCGATCT GCAAGCCTTG
TTAGAGGAGT AA
 
Protein sequence
MPYLHTTRNG IRILVEELPH THSIAIGCFI DIGARYETAE IAGAAHFIEH MLFKGTGAYP 
TAHAISLAIE GVGGYLNAST GYETTAFYAK VAAIHFNRAL HVLSEMVQRP LFEAHELEKE
RRVIIEEIRG IQDNPTELVH ELLQQTMWGD HPFGRDIAGR IDTVSAIARH ELLQFFAQGY
HAGTLVISVA GNIRAEQAIP AIEQAFADVP AGQRPIALPA PSLPIEHRLN LLPRDIEQGN
FCLGLPGVSY HDPDRRAVQA LDALLGGGMS SRLFQTIREE HGLSYNIGSY HNEFADTGMW
VIYAGVEPDA LRDAVAMTRA IIRDVVEHGP TDQELTTVKE QLKGSLLLSL EDTWAIASRN
ATSLLRYQTV PSVEQIIAEI DALTLADLQR AAHRLLSTNQ QWLAVVGPYA EDDEADLQAL
LEE