Gene Cagg_0018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0018 
Symbol 
ID7269015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp28685 
End bp29509 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content55% 
IMG OID643564891 
Product6-pyruvoyl tetrahydropterin synthase and hypothetical protein 
Protein accessionYP_002461407 
Protein GI219846974 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0720] 6-pyruvoyl-tetrahydropterin synthase 
TIGRFAM ID[TIGR03367] queuosine biosynthesis protein QueD
[TIGR00039] 6-pyruvoyl tetrahydropterin synthase/QueD family protein 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAGTCG CTACGCGCCG ATTTGAATTC TCTGCTGCAC ACCGGTATTG GCGCGATGAC 
TGGAGCGCCG CCGAAAATGA GCGAGTCTTT GGGCCATATA CAAGCCCGTA TGGACATGGG
CACAATTATA CCCTTGATGT GAGCATCACC GGTGAGCTAG ATGAGCGGAC CGGCATGGTT
ATGAATATGA CCGAACTCAA GGCAATCGTC AATGAGGTGC TCGAAGAGTT CGATCACAAG
CATCTCAACC TCGACACACC GTATTTCCGC GATCAGATCC CGACGACCGA AAACTTCGTT
CGTGTGCTCT GGCGACTGAT CGCAGCGCGC ATACCGGCTC ATGCGCGGCT CGCTCATCTC
CGGTTATACG AACAGCCTGA CCTCTGGGTC GACTACGACG GTGTTGGTGA AACCCAATTT
GCCCGCTTAT ACACCTTTGC CGCTGCTCAT CGGTTACATG CACCGGCGCT CAGCGATGAA
GAAAATCTCG CGATCTACGG TAAGTGCAAC AATCCAAATG GCCACGGTCA TAACTACACG
TTGGAAGTTA CCGTCCAGGG TGAGATTGAC CCCGCCACCG GTATGCTCGT CGATCTGGCC
TGGCTCGATC AGACGGTACA TTCGGTGATC GATCTGCTCC ATCTCCACCA CCTTGACCGG
GAAATTCCGG CCTTCGCCGA GCGACCTTCG ACCGCCGAAA ATATTATCGT CTATCTGTGG
AACGAGCTGG CTCCTAAACT AAAGGGCCGG CTAGCCCTGC TGCGCCTATG GGAGACGCGC
AAAAATATCT TTAGCTACGC CGGTCCGGCA TCGATCCCCG CTTAG
 
Protein sequence
MVVATRRFEF SAAHRYWRDD WSAAENERVF GPYTSPYGHG HNYTLDVSIT GELDERTGMV 
MNMTELKAIV NEVLEEFDHK HLNLDTPYFR DQIPTTENFV RVLWRLIAAR IPAHARLAHL
RLYEQPDLWV DYDGVGETQF ARLYTFAAAH RLHAPALSDE ENLAIYGKCN NPNGHGHNYT
LEVTVQGEID PATGMLVDLA WLDQTVHSVI DLLHLHHLDR EIPAFAERPS TAENIIVYLW
NELAPKLKGR LALLRLWETR KNIFSYAGPA SIPA