| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_0016 |
|---|
| Symbol | |
|---|
| ID | 7269013 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | - |
|---|
| Start bp | 27170 |
|---|
| End bp | 27865 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643564889 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_002461405 |
|---|
| Protein GI | 219846972 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAATCGA TCCTCATTAC CGGCGCTTCG CGTGGCATTG GCGCAGCGAC CGCTTTGGCA
CTGGCTAAAC CCGGTACCCG TCTCACCCTG GCGGCACGTA ACCGATCGGC GTTAGAAACT
GTAGCCGCAC AGGTCACCGC TACCGGCGCT GAATGCATCG TTGCTCCGTG CGATGTCACC
GATCCGGTAC AGGTGAATGA AACGGTGGCA ATCGCTGCCG ACGCCGGCCG GCTTGATGTC
GTGGTCCACA GTGTCGGCGG CGCGCTCGTT GCACCGCTAG AGGCCCTGAG TCTGGCCGAA
TGGGAAGCGC ACCTGCGGAC CCAGCTTACC AGTCTTTTCC TGGTGGCACA GATGGCGGTT
TCCCGCATGG ATCGCGGTGG TTTATTGATC AATATTGCCT CGGTTGCCGC GCGTCAGGCA
TTTCCCGGCT GGTCGGCGTA TGTCGCAGCC AAACACGGTG CGCTCGGTTT TGCCGCCGCC
ATCCGGGAAG AACTGCGCCC ACGTGGGATC CGTGTCTGTT CAATTTTGCC CGCCGCTACC
AATACTGCAA TCTGGGACGC TATTCCCGGT GAGTGGGCAC GAGATAATAT GTTGCAACCG
GCCGATGTTG CGGCGGCAAT CGCTGCCGTT GTCGCGCTAC CGCCATACGT GACGGTGGAA
GACCTCACGA TTGGGCATGT CGTCGGACGA CTATAG
|
|---|
| Protein sequence | MQSILITGAS RGIGAATALA LAKPGTRLTL AARNRSALET VAAQVTATGA ECIVAPCDVT
DPVQVNETVA IAADAGRLDV VVHSVGGALV APLEALSLAE WEAHLRTQLT SLFLVAQMAV
SRMDRGGLLI NIASVAARQA FPGWSAYVAA KHGALGFAAA IREELRPRGI RVCSILPAAT
NTAIWDAIPG EWARDNMLQP ADVAAAIAAV VALPPYVTVE DLTIGHVVGR L
|
|---|
| |