Gene Cagg_0013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0013 
Symbol 
ID7269009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp21400 
End bp22344 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content52% 
IMG OID643564885 
Productresponse regulator receiver modulated diguanylate cyclase 
Protein accessionYP_002461402 
Protein GI219846969 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.992585 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCAAGG AGCGTATCCT CGTGGTTGAG GACCAGCCAG ACATCTCAAG CCTGCTGAAG 
ATCTACTTCA CCGCACAGGG GTATGAGGTC TACACAGCCT TACGTGGTCA ACAGGCCCTA
GAGATTTGCA GCAAAACACC CCCAAATCTG GCCCTGCTCG ATGTGAACCT CCCCGATATG
GAGGGATACG ATGTGGGACG AGCCTTGCGG GCAAGCCCGC GCACTCGTCA TATTCCGATT
ATTTTTCTGA CCGCACGCGG TGAACGGCGT GACCGGCTGA TCGGGTTGGG TGAAGTTCAG
GCGCAATATT ACATCGTGAA ACCGTTCGAT ATTGAAGAGG TTCACACGAT TGTCAAGAAT
CAGCTTGAAG AAGCTCGCCG ACGCAATCAA CTGCACCCCG TCACGAATTT GCCAACCGCT
GAGTTACTCA ATGATCAGCT CCGGCAACTT CTCACTGCAT CACATTGGGC ACTCATTAAT
GTGCATATTA ACGGGTTTGA GACCTTTACC AATGTCTACG GTGCTGTTGT TGGCGAAGAT
GTGTTACGTT TTGTCGCGCT CATGCTCAAT GAAGTGGTGA GTGAACTGGG CGGCAATGAG
GAGTTTGTCG GTCAGCAATC GGTTGGGCAG TCATTCTTGA TCACGACTCT TCCCGAACGG
GCACAAGCCA TCTGTGAACG GATTATTGCC CGATTTGATG ACGAGATTGG CCTACACTAC
AACTACCGTC ATCGGAAACA AGGCTATATC GAGTTTATTG ATGACACCGG TGAAACACGA
CAGGCTCCAC TCATGTCGCT CTCTATTGGT GTCCTGACGC ACAACGATGG CCCCTTTGCC
GATATTCGTG AGCTGAGTGA GGTAGCAGAG GAGGTACGTC AGCGTGCATT GGTACAGGCA
CGTGAACAGG GTAAACGTAG TTTCGTAGTG TATGGCCGCT CTTGA
 
Protein sequence
MSKERILVVE DQPDISSLLK IYFTAQGYEV YTALRGQQAL EICSKTPPNL ALLDVNLPDM 
EGYDVGRALR ASPRTRHIPI IFLTARGERR DRLIGLGEVQ AQYYIVKPFD IEEVHTIVKN
QLEEARRRNQ LHPVTNLPTA ELLNDQLRQL LTASHWALIN VHINGFETFT NVYGAVVGED
VLRFVALMLN EVVSELGGNE EFVGQQSVGQ SFLITTLPER AQAICERIIA RFDDEIGLHY
NYRHRKQGYI EFIDDTGETR QAPLMSLSIG VLTHNDGPFA DIRELSEVAE EVRQRALVQA
REQGKRSFVV YGRS