| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4843 |
|---|
| Symbol | |
|---|
| ID | 7261872 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 5160604 |
|---|
| End bp | 5161686 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 643564754 |
|---|
| Product | Methicillin resistance protein |
|---|
| Protein accession | YP_002461274 |
|---|
| Protein GI | 219670839 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG2348] Uncharacterized protein involved in methicillin resistance |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0000953777 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTATA CTGCAAGGTT AATAGATGAC GCTGCAAAAG AGCGTTTTGA TCAATTTATG
GCTCGTCACG CCAAGGGTCA TGTACTGCAG ACCTGGGGCT GGGGAGAGCT CAAAAGCAAA
ACCGGCTGGA AACCGTGGCG CTTAGTCCTG GAAGATCGTG GCGAAATCGT CGCCGCTATC
TCCATTCTCG AGCGCAAGAT ACCTGTGGTG GGAATTCCGA TCTTTTATGC TTCCCGGGGA
CCTGTTCTCG ATTGGACTGA TCATGAATTG TTTGATGCCC TGCTTGTGGA GATTAAAAAG
CTGGCCAAAA AGCGAGGGGC TATTTTTCTG AAAATCGACC CGGATATTCC TTCTGCAGAT
CAAGATTTAG AAGGTTACCT GAAAAGCCGG GGGTTCCGCA GTGCAGAAAC CGGCAAAGGT
TTTGAAGGAG TCCAGCCTAA ATACGTCTTT CGTCTGGATA TCTCTCCTGA TGAGGAGACG
CTTATGGCGC AAATGCACCA GAAGACCCGC TATAATGTTA AATTGGCCAC GAAAAAAGGC
GTCGCCATCC GCGTCGGCAC GAAAGAAGAT TTGCCCGCTT TTTATCGAGT GCTTAAAGAA
ACGACGGAGC GGGATAAGTT CCTGGTTCGG AACTACTCCT ATTTTGAGGA TATGTATGAT
GAGCTTCATG CTGCCGGCAT GGCGGAGCTG TTTATCGCCG AATATGAAGG ACAGATCATC
GCAGGCACCC TGGCTCTGAT TATCGGAGAA AAGGCCTGGT ATCTCTATGG CGCCTCCTCC
AATTCCCATC GAAATGTTAT GCCCAATTAT CTGATTCAAT GGGAAATGAT CCGCTGGGCC
AAAGCCAAAG GCTGCACCCT CTACGATTTT CGCGGGGTAC CCGGCCATCT CACCGAGGAC
AATCCTCTCT ACGGCCTTTA CCGGTTCAAA AAAGGCTTCA ACGGCGAGTA TACCGAATTC
ATCGGCGAAT GGGATTTGGT CTATCGTCCG GTGGTCTACT TTCTCTGGAA CACTCTCGAA
CCGGTGTACT CCGATCTGGT TAAGGGGATG ATCGGGAAGC TGCGGCGAAG AAATAAGGGA
TAA
|
|---|
| Protein sequence | MPYTARLIDD AAKERFDQFM ARHAKGHVLQ TWGWGELKSK TGWKPWRLVL EDRGEIVAAI
SILERKIPVV GIPIFYASRG PVLDWTDHEL FDALLVEIKK LAKKRGAIFL KIDPDIPSAD
QDLEGYLKSR GFRSAETGKG FEGVQPKYVF RLDISPDEET LMAQMHQKTR YNVKLATKKG
VAIRVGTKED LPAFYRVLKE TTERDKFLVR NYSYFEDMYD ELHAAGMAEL FIAEYEGQII
AGTLALIIGE KAWYLYGASS NSHRNVMPNY LIQWEMIRWA KAKGCTLYDF RGVPGHLTED
NPLYGLYRFK KGFNGEYTEF IGEWDLVYRP VVYFLWNTLE PVYSDLVKGM IGKLRRRNKG
|
|---|
| |