Gene Dhaf_4828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_4828 
Symbol 
ID7261857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp5149237 
End bp5149686 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content48% 
IMG OID643564739 
Productsugar-phosphate isomerase, RpiB/LacA/LacB family 
Protein accessionYP_002461259 
Protein GI219670824 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0698] Ribose 5-phosphate isomerase RpiB 
TIGRFAM ID[TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family
[TIGR01120] ribose 5-phosphate isomerase B 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00000305549 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAATTG CACTAGGAGC AGATCATGGG GGGTACGAAC TTAAAAATGA GATTCGTGCC 
CATTTAGAAG AACAAGGGAT TGAGATTCTG GATTTCGGCA CCAACACTAA AGATTCTGTG
GAGTATCCCA GGTATGGTTT CTATGTAGGT GATGCAGTGA CTAAAGGCAA AGCAGACTTA
GGAATTGTGG TCTGTGGTAC GGGCTTAGGG ATCTCCATCG CTGCCAATAA AGTACCAGGG
GTTCGTGCTG CAGTCTGCAC TGAGACCTAT TCCGCACGTA TGGCGCGGGA ACATAATAAT
GCCAATATCC TGGCTCTCGG AGGCAGAGTC ACCGGTTTGG GCTTGGCCTT GGATATCGTG
GATATGTTTG TTAAAACTCC TTTTGCCGGT GGACGACATG CTTGTCGGGT CGATCTCATC
GAGGCCATTG AAAAAGGAGA TACTCTCTAA
 
Protein sequence
MKIALGADHG GYELKNEIRA HLEEQGIEIL DFGTNTKDSV EYPRYGFYVG DAVTKGKADL 
GIVVCGTGLG ISIAANKVPG VRAAVCTETY SARMAREHNN ANILALGGRV TGLGLALDIV
DMFVKTPFAG GRHACRVDLI EAIEKGDTL