Gene Dhaf_4826 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_4826 
SymbolglyA 
ID7261855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp5147360 
End bp5148613 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content52% 
IMG OID643564737 
Productserine hydroxymethyltransferase 
Protein accessionYP_002461257 
Protein GI219670822 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0112] Glycine/serine hydroxymethyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.0982e-09 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTATA TTAAGGAATG GATTCTCCCT CAGGATCCCG AAGTGGCGGA GGCTATTGCC 
CAGGAGGAAC AAAGGCAGCG CTATAAAATC GAGCTGATTG CCTCAGAGAA TTTTGTGAGC
CGAGCGGTCA TGGCCGCCCA GGGTTCCGTT CTTACCAATA AGTATGCGGA AGGATATCCG
GGAAAACGCT ATTATGGCGG CTGTGAGTAT GTGGATATCG TTGAGGATCT GGCCCGGGAG
CGGGTGAAAA AGCTTTTTGG TGCGGAACAT GCCAATGTCC AGCCTCATTC CGGCGCCCAG
GCTAATACCG CTGTATATTT TGCCATGCTT AAACCCGGGG ATACGGTTCT CGGCATGAAT
CTTTCCCATG GGGGTCATTT AACCCACGGC AGCCCGGTGA ATATCTCCGG GATGTATTAT
AACTTTGTCG CCTATGGGGT GGATCAAGTC ACCGAACGCA TTGATTATGA TGTGGTGCGC
CAATTAGCCC TTGAGCATCG CCCTAAGCTG ATTGTAGCGG GAGCCAGTGC CTATCCCAGA
CAAATCGACT TTGCCCGCTT AAGAGAAATT GCCGATGAGG CAGACTCTTA CTTCATGGTG
GATATGGCCC ATATTGCGGG CCTGGTGGCA GCCGGGCTTC ATCAAAACCC TGTTCCCTAC
GCACATTTTG TAACCACCAC CACTCATAAA ACCCTGCGGG GCCCCCGGGG GGGACTGATT
CTATGCCAAG AAGAATTTGC CAAAGCTATC GATAAAGCCA TCTTCCCCGG CATTCAGGGC
GGCCCGCTGA TGCATGTGAT CGCGGCTAAG GCTGTTGCCT TCGGCGAGGC TTTAAAGCCG
GAATTCGTGG AATATCAAAA ACGCATTGTG GAGAATGCTA AAGTATTATC GGAAACTCTG
GCGGAAAAAG GCTTCCGCAT CGTTTCCGGA GGTACGGACA ACCATTTGAT GCTTGTGGAT
GTACGGTCTA AAGGCTTGAC AGGGAAAGAA GCAGAGTATA TTTTAGATGA GGTCGGTATT
ACGGTGAATA AGAACACCAT CCCCTATGAT CCGGCCAGCC CTATGGTAAC CAGCGGCATC
CGCATCGGCA CCCCTGCCGT GACCAGCCGC GGTATGGATA CCCTGGCGAT GAAAAAGATT
GCCGCAGCCA TCGACATTGC TTTATCAGAA CCCAATGAAG CGGGGGCTGC CAAAGCCCGG
GATATGGTTG CAGCACTCTG CGCGGAATAC CCGCTCTACC CAAATCTAGA TTAG
 
Protein sequence
MDYIKEWILP QDPEVAEAIA QEEQRQRYKI ELIASENFVS RAVMAAQGSV LTNKYAEGYP 
GKRYYGGCEY VDIVEDLARE RVKKLFGAEH ANVQPHSGAQ ANTAVYFAML KPGDTVLGMN
LSHGGHLTHG SPVNISGMYY NFVAYGVDQV TERIDYDVVR QLALEHRPKL IVAGASAYPR
QIDFARLREI ADEADSYFMV DMAHIAGLVA AGLHQNPVPY AHFVTTTTHK TLRGPRGGLI
LCQEEFAKAI DKAIFPGIQG GPLMHVIAAK AVAFGEALKP EFVEYQKRIV ENAKVLSETL
AEKGFRIVSG GTDNHLMLVD VRSKGLTGKE AEYILDEVGI TVNKNTIPYD PASPMVTSGI
RIGTPAVTSR GMDTLAMKKI AAAIDIALSE PNEAGAAKAR DMVAALCAEY PLYPNLD