| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4724 |
|---|
| Symbol | |
|---|
| ID | 7261753 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 5043050 |
|---|
| End bp | 5044795 |
|---|
| Gene Length | 1746 bp |
|---|
| Protein Length | 581 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643564635 |
|---|
| Product | Radical SAM domain protein |
|---|
| Protein accession | YP_002461155 |
|---|
| Protein GI | 219670720 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1032] Fe-S oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCGAATTG TGTTGGTCGC TTTGAATGCC AAGTATGTGC ATACCAATCT AGCTATACGC
TACTTACGTG CCAGTGTCCA AGGTGAATTC CCCGATGTTG ACCTGCGGGA ATTTACTATT
AATGAGTCCA TGGAGCGGAT TGAAGCAGAA TTATATGAAG CCAAGGCAGA TGTCATTGGC
TTTTCATGTT ATATATGGAA CTTGAAGGAG ACCCTGGCCG TCATTCGTCG GCTGAGGCCT
GTCTCTCCCC ATACCCGGAT TGTGGTAGGG GGTCCGGAGG TTTCTTTTGA AGGGGAAGCC
TTTTTAAGAG AGAATCCTGA AATTGATGGA GTGGTTCTGG GGGAAGGTGA AATCACCTTC
CTGGAACTCC TGCGGGCCTG GGAATCAGGC GCCAGCCTCT CTCAAGTACA GGGGCTGGCC
TGGCGGGCTT CTTCCCGGGA GATCATCCTC AACCCGCCCC GCCGGCAGCT GGCCATGGCT
GAACTGCCTA ATCCCTATAA CCATGAAGAA GAGCTTAAAG GGCGCTTGGC CTATGTGGAG
ACAACCCGGG GCTGCCCTTT TAACTGCCAA TACTGTCTTT CCTCCACCTT TCAAGGGGTC
AGGTATCTTT CCCCGGAACG TTTCCGCCAG ATTATGCGTC AAACGTTGCG CTATGGAGCG
CGGACCATTA AATTAGTGGA TCGCACGTTT AATGTGAATA AAGAGCATGC CTTGAGGATT
TTGGATATTG CCCGGGAAGA AGCGGCCCAT TACCCGCCGG AGGCAGGTAT CCGGGTCCAT
TGCGAGATGG CGGGGGAGCT GTTGGATGAG GAGTGGCTTC TTTATTTGCA GGATTATCCT
CAGGACCTGG TTCAGTTTGA GATTGGGGTG CAGTCCACCC ATCCGGAGAC TCTGGCCGCG
ATTCACCGCC CTCAGCATTT TGAGCGCTGG GCAAAGTATA TCCGGGAGAT GCAAAGGTTG
AATAAAGCCC ATCTGCATCT GGATCTCATC GCCGGTCTGC CTAAAGAAGG CTGGGAGAGT
TTCCGCAGAT CCTTTAATGA GGTCTATGAC GTTCAACCGG ATATGCTTCA GTTAGGCTTT
TTGAAAGTGC TTAAGGGGTC GGGACTGCGT GAGCAAAGGG GGGAATATGG GCTGGTCTTT
GCTCCGGATC CTCCGTACAC CATTTTGCAG ACCGATGATT TAAGCCATGA CGAGCTGCTC
CGGCTTCACC GGCTGGAGGA ACTTCTGGAT CGCTATTATA ACTCGGGCCG CTTCAGTCAT
TCTTTGGCTG GGGCTGTCGG GAACTATCCC ACTCCCTTTG ACTTTTATCA TGAGTTTGCT
GAGTTTTGGC ACGGGCAGGG ATGGTTCAGG CAGAGCTGGT CGGCTAAAGC GCTTTTTGAA
AAACTCTGGG ATTTTGTTGC CGCTCAGAAA ACCCCCTGGG GTTGTGAGCT GACGGCAGCC
CTAAGAGAAC GGTTGAGATT GGATTATTAT CTGTGGGAAC GGCCCAATGG TGTTCCGGAC
TATCTGCTTC CAACCGAGGG TGCCCTGCCG CCCAACTATG GGGAGATGAA ATTTTCCCTT
CAGCAGCATC GGGGCTGGGA GCAAATCATA CCGGAGTTTC CCGGGATGGA CCGCCGGCAA
TGGAGCCGGG CGACGGCTGT AGAGTATTTC CAGGAGCCGC AGCCCCGCTG GCTGCTGTTT
TTTTACAACA AGGGGCGGAC TCAAACCTAT CCCGTCCCGG GAGAGTTTTT CAATGAAGTG
TATTAG
|
|---|
| Protein sequence | MRIVLVALNA KYVHTNLAIR YLRASVQGEF PDVDLREFTI NESMERIEAE LYEAKADVIG
FSCYIWNLKE TLAVIRRLRP VSPHTRIVVG GPEVSFEGEA FLRENPEIDG VVLGEGEITF
LELLRAWESG ASLSQVQGLA WRASSREIIL NPPRRQLAMA ELPNPYNHEE ELKGRLAYVE
TTRGCPFNCQ YCLSSTFQGV RYLSPERFRQ IMRQTLRYGA RTIKLVDRTF NVNKEHALRI
LDIAREEAAH YPPEAGIRVH CEMAGELLDE EWLLYLQDYP QDLVQFEIGV QSTHPETLAA
IHRPQHFERW AKYIREMQRL NKAHLHLDLI AGLPKEGWES FRRSFNEVYD VQPDMLQLGF
LKVLKGSGLR EQRGEYGLVF APDPPYTILQ TDDLSHDELL RLHRLEELLD RYYNSGRFSH
SLAGAVGNYP TPFDFYHEFA EFWHGQGWFR QSWSAKALFE KLWDFVAAQK TPWGCELTAA
LRERLRLDYY LWERPNGVPD YLLPTEGALP PNYGEMKFSL QQHRGWEQII PEFPGMDRRQ
WSRATAVEYF QEPQPRWLLF FYNKGRTQTY PVPGEFFNEV Y
|
|---|
| |