| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4713 |
|---|
| Symbol | hppA |
|---|
| ID | 7261742 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 5029152 |
|---|
| End bp | 5031167 |
|---|
| Gene Length | 2016 bp |
|---|
| Protein Length | 671 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 643564624 |
|---|
| Product | membrane-bound proton-translocating pyrophosphatase |
|---|
| Protein accession | YP_002461144 |
|---|
| Protein GI | 219670709 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3808] Inorganic pyrophosphatase |
|---|
| TIGRFAM ID | [TIGR01104] vacuolar-type H(+)-translocating pyrophosphatase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000164217 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTTG CTTCAACGCC TATATGGGCT GTCCTAGCAG GTCTAGTCGG GCTGGCATTT
GCCTTCTATT TCGCAAGTAG CGTTTTAAAA GAAAGCCCGG GAAATGCTCG GATGCAGGAG
ATTTCTCTCG CGATTCAAGA GGGTGCCATG GCATTCCTCA ACCGTCAGTA CAAAACACTG
ATTCCCTTTG TAATCATAAT CTTTCTTATT CTAACTTTTT TAAAAGGCTG GCAAACGGCT
GTATCTTTCC TGGTGGGAGC GCTGCTTTCC GCTGTGGCCG GTTATGTGGG CATGGGAATT
ACCACCCGGG CTAATGCCCG GACCACGGAA GCTGCCCGGA CCAGCCTGAA CAAGGCTTTG
GGCGTGTCCT TCCGCGCCGG GGCGGTTATG GGTCTTTCTG TTAACGGCTT AGGTCTCATT
GGGGTTGCCG CTCTTTTCCT ATGGTTCCAG GATGCGGAGA CCATTAACTC CTTCGCCTTT
GGTGCCAGTG CCATTGCCTT GTTTGCTCGT GTCGGCGGTG GTATCTATAC CAAAGCAGCC
GACGTGGGTG CGGACCTGGT AGGTAAAGTC GAAGCCGGCA TTCCTGAAGA TGATCCCCGT
AACCCTGCTG TGATCGCCGA TAATGTCGGG GATAATGTGG GTGATACCGC CGGGATGGGC
GCCGACCTGT TTGAATCTTA TGCTGCTACC ACCATTGCGG CGATGCTGAT TGGCGCTGTG
GCTTTCAAAT CCCTAGGAGG GGGAGTTTCC GGACTTATGC TGCCGCTGAT GATCGGTATC
GCGGGAATAC TTTCTTCGAT TATCGCCAGC TTTTTCGTGC GCACCGGGGA AAATGCCAAC
CCTCAAACGG CTTTAAACAA AGGCTTATGG GGAACTAACC TTCTAACGGC CATTGCTTCC
TACGCCATCG TCCAATTGAT GATCACTGAA CCTGTCCATG TCAGTGAAAG CTTAACGCTG
ACTGCTAACA ATATATTTAT TGCTATTGTC TGTGGATTGG TTGTGAATAT TCTGATCGGT
TTATTGACCG AGTACTATAC TTCGAATCAG AAGGCTCCTG CCCAAGCTAT TGCCAAAGCT
TCTGAGACCG GTGCCGCCAC CAATATTATT CAAGGTCTGG CTACCGGAAT GAAGAGTACC
GCTCTTCCTG TTGTCGTGAT CTGTGTTGCT ACTTATGTTT CTTTTGCAGC AGCCGGTATC
TTTGGTATTG CTATGGCTGC TATGGCCATG CTTTCTACGG CCGGTATGGT TGTAGCCATC
GACTCCTTTG GACCTGTTGC CGATAATGCC GGCGGTATCG CAGAGATGGC TGATCTGGAT
CCCAGTGTCC GCAAGACCAC GGATAAACTG GACTCTGTAG GGAACACCAC TGCTGCGGTG
GCGAAAGGAT TTGCCATCGG TTCCGCGGCC TTGACAGCTT TAGCTCTCTT TAATGCTTAC
TCTGAGCTTG CTCATCTGGA TCGAATCGAC ATCCTGGTAC CCACCACGAT TATCGGTCTC
TTCATCGGAG CTGCGCTGCC CTTCCTCTTC TCTGCTTTTG CTATGGAAGC TGTAGGTAAA
GCTGCTTTCG AAATGATTGG TGAGGTCCGC CGTCAATTCC GTGAGATTCC TGGTCTTATG
GAAGGAAAGG CTAAACCGGA TTATCGTGCT TGCGTGGATA TCTCCACTAA AGCTGCTATT
CGTCAAATGA TTGTTCCTGG ACTCTTAGCC ATCGGCTCTC CGATCCTGGT AGGATTTTTA
CTCGGTAAGG ATGCTTTAGG TGGAATGCTG GCCGGTGGAA CAGTTTCCGG ATTGCTCATG
GCCATCTTCA TGGCTAACGC CGGTGGAGCC TGGGACAATG CCAAGAAGTA TGTTGAAGCC
GGAAATCTCG GCGGTAAAGG AACCCCCACC CATGCTGCAG CTGTCATCGG GGACACTGTA
GGGGACCCCT TCAAGGATAC GGCCGGTCCG TCCTTAAACG CCTTGATTAA GGTTATGGGT
ACGATTTCTC TGATTATCGC GCCGCTCTTA ATTTAA
|
|---|
| Protein sequence | MDFASTPIWA VLAGLVGLAF AFYFASSVLK ESPGNARMQE ISLAIQEGAM AFLNRQYKTL
IPFVIIIFLI LTFLKGWQTA VSFLVGALLS AVAGYVGMGI TTRANARTTE AARTSLNKAL
GVSFRAGAVM GLSVNGLGLI GVAALFLWFQ DAETINSFAF GASAIALFAR VGGGIYTKAA
DVGADLVGKV EAGIPEDDPR NPAVIADNVG DNVGDTAGMG ADLFESYAAT TIAAMLIGAV
AFKSLGGGVS GLMLPLMIGI AGILSSIIAS FFVRTGENAN PQTALNKGLW GTNLLTAIAS
YAIVQLMITE PVHVSESLTL TANNIFIAIV CGLVVNILIG LLTEYYTSNQ KAPAQAIAKA
SETGAATNII QGLATGMKST ALPVVVICVA TYVSFAAAGI FGIAMAAMAM LSTAGMVVAI
DSFGPVADNA GGIAEMADLD PSVRKTTDKL DSVGNTTAAV AKGFAIGSAA LTALALFNAY
SELAHLDRID ILVPTTIIGL FIGAALPFLF SAFAMEAVGK AAFEMIGEVR RQFREIPGLM
EGKAKPDYRA CVDISTKAAI RQMIVPGLLA IGSPILVGFL LGKDALGGML AGGTVSGLLM
AIFMANAGGA WDNAKKYVEA GNLGGKGTPT HAAAVIGDTV GDPFKDTAGP SLNALIKVMG
TISLIIAPLL I
|
|---|
| |