| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4696 |
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| Symbol | |
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| ID | 7261725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 5011148 |
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| End bp | 5013691 |
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| Gene Length | 2544 bp |
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| Protein Length | 847 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 643564608 |
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| Product | Trimethylamine-N-oxide reductase (cytochrome c) |
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| Protein accession | YP_002461128 |
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| Protein GI | 219670693 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR02166] anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0792872 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAAATA TTCTTGAAGG TATTATTAAT AAACAAATAA ATCGCAGGAA TTTTCTAAAA
GCCAGTGCCA TCGGCGCAGC CGGCCTGGCT TTACCCGGCT GCAGTTCCAG TACGCTCACC
AATACCGGAG TTGACGCAAC GGCTGACGGC AATGAGGGTC AATGGATTAC GGCAGCTTGC
TGGCATAACT GTGGCGGACG CTGTCTGAAC AAAGCTTTAG TGGTGGATGG AGTGGTTGTT
CGGCAAAAAA CGGACGATAC CCATGAAGAT AGTCCGGACT TCCCTCAGCA AAGAGGCTGT
GCCCGCGGCC GTTCTCACCG CAAAATGGTG ATGGGCGCCG ATCGTCTCAA ATACCCTATG
AAACGCAAAA ACTGGGCGCC GGGGGGCGGC AACAAAGAAC TTCGCGGCCA AGACGAATGG
GTGCGCATTT CTTGGGATGA AGCCCTTGAT ATTATGGCTT CTGAATTAAC GCGGATTAAG
GATGCCTATG GCAACCGCGC CATTTTTGCA CCTGTAGGCG GCTCCGACAG TCTTCAAGCT
GTGCCCCGTC TGCTCAGTGC TTTTGGCGGT TATACGGCCC GTTGGGGAAG TGTGTCCTGG
GGATCATGGC CTACAGTCTA TTCCAAGGTT ACCGGCCAGC CTCACAACGG AGCCAGCGAC
GGCAACGATC GTTTCCGCTT GAGAGAGTCC AAGCTGATCA TTCTCTGGGG AGCTAATCCC
GCTCAATCCA GTCAGGGTTT GCCGGCTTAT AATTATCTGC AGGCCAAAAA AGCCGGGGTT
AAATTTATCG TGATTGATCC CATTTACTCG GAATCGGCGA GAGTTTTGGC CGATGAATGG
ATTCCGATCC GTCCGGCTAC AGACACAGCC TTGATCTTAG GTATGGCCTA CTACATCATT
AAAAATAATC TGCTTGACCA AAATTTCCTG GATAACTGCA CAATTGGCTT TGATGCCGAT
CACTTGCCGG AAGGTGCCGA TCCCAAAGAT AATTTCAAAG ATTATGTTCT GGGAACCTAT
GACAATACGC CCAAGACTCC GGAGTGGGCT TCCGAAATCT GTGGTGTTCC TGCTGTCAAG
ATCGCCGAAT TTGCCCAAGA GTATGCAACC ACGAAACCGG CGGCGATTAT TTCCGGCGGA
GCCCCGGCCC GGATCAATAA TGGCGAGCAT TTGCCCCATG CCATGATGAC CTTGGCCTAT
ATGGTAGGAA ACGTGGGTAT TCCCGGTGCC GGTGTCAGCC CGAATATGCA TAATTCGGCC
ACCAACGCCG GACCGGCTTT GGTTAAAGCA GGAGGCAACG GTCTGCCGAA AATAGTCAAT
CCCATTGATG ACAGTATCAA TAGCGGCGAA ATGTATGACG CCATTCTTAA TGGCAAATAC
ATCAAGCAAA AAGGAGAAAT CAGAGACATC AACATCCAGA TGATTTGGAC CTGGTTCAGC
CATAACCTTA ATCAAAGGGC AGGGTCCAGC CAGGGTATAG ATGCGTATCG GAAGGTTGAG
TTCGTGGTCG CTCAGAACAT GTTTTTAACA GCTGACGCCC AATATGCCGA TCTGGTGCTC
CCCGTGACCT CCGAATGGGA ACGGCTGGGC GGACTCCTGA CAGGCAACCG GGAAATCCTC
ATCCATTATC GCCAGATTGT CGAGCCCCAA TATGAAGCCA AGAGTGATCT GTGGATTGTC
AAGGAGATTG GCAAAAAGCT GGGCATCGAT CCGACGAAAG TTTGCCCCGT ATCTGAAGAA
CAGCAAATGT ACAATCAGTT GGCAGGGGCT GAAGTCATCA AAGAAGACGG CTCAGGATAT
GAAAAGCTGC TCACCCTGAC GGCTGAGGAT ATCAAGGTCT TGGGTGCCGA GGGCGAACCA
CAGACCGGCC GCATCACTTA CCAGGAATTT AAGGAAAAGG GCATTTATCA AGTTCCCCGT
CACAAAGGAG ATAAGTTGGA ATTTACCAGC TTTGAAGATT TTGTCGCCGA TCCTGCCAAT
CATAAAGTAA ATACTCCCAG CGGTAAATTT GAAATTTACT GCAAGTCTTT GGCAGACAAT
ATCGAAAAGG TGGGCTTCAC CAGCAAATCC CCCATTCCTA AATATGAACC TTCTGTGGAA
GGTTACGAAG ATGGCCAGAA AAACGGCTAT CCCTTCCAAT TGATCACGAT TCATTACTTC
AGAAGATCCC ACTCAACTCT GGATAATGTA ACCTGGCTCA GAGAGGCTTT CAACCAGGAA
TGCCGCCTGA ATGCCCAGGA TGCGGCTGAA TTGGGAATCA AAACCGGCGA TATTGTCAAA
GTGACCAGCC AGCATGGTTC TGTCATTCGC CCTGTCTATG TCACCGAAAC CATTACCCCC
GGTGTCGTAT CCCTTGGGGA AGGGGCCTGG ATTGATATGG ATGAAGGCAA TGGCGTGGAT
AAAGCAGGCT GTACCGGAAT TCTCAACGGG CCGATTGCCA CAGGTCAAGG CCACACCGGT
TACAACTCCT GTAATGTGAA GGTGGAGAAA TACGATAAGC CCCTTGCCCT CGATGTCAAC
TGGCCCCAAC GGATAATTTT ATAG
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| Protein sequence | MGNILEGIIN KQINRRNFLK ASAIGAAGLA LPGCSSSTLT NTGVDATADG NEGQWITAAC
WHNCGGRCLN KALVVDGVVV RQKTDDTHED SPDFPQQRGC ARGRSHRKMV MGADRLKYPM
KRKNWAPGGG NKELRGQDEW VRISWDEALD IMASELTRIK DAYGNRAIFA PVGGSDSLQA
VPRLLSAFGG YTARWGSVSW GSWPTVYSKV TGQPHNGASD GNDRFRLRES KLIILWGANP
AQSSQGLPAY NYLQAKKAGV KFIVIDPIYS ESARVLADEW IPIRPATDTA LILGMAYYII
KNNLLDQNFL DNCTIGFDAD HLPEGADPKD NFKDYVLGTY DNTPKTPEWA SEICGVPAVK
IAEFAQEYAT TKPAAIISGG APARINNGEH LPHAMMTLAY MVGNVGIPGA GVSPNMHNSA
TNAGPALVKA GGNGLPKIVN PIDDSINSGE MYDAILNGKY IKQKGEIRDI NIQMIWTWFS
HNLNQRAGSS QGIDAYRKVE FVVAQNMFLT ADAQYADLVL PVTSEWERLG GLLTGNREIL
IHYRQIVEPQ YEAKSDLWIV KEIGKKLGID PTKVCPVSEE QQMYNQLAGA EVIKEDGSGY
EKLLTLTAED IKVLGAEGEP QTGRITYQEF KEKGIYQVPR HKGDKLEFTS FEDFVADPAN
HKVNTPSGKF EIYCKSLADN IEKVGFTSKS PIPKYEPSVE GYEDGQKNGY PFQLITIHYF
RRSHSTLDNV TWLREAFNQE CRLNAQDAAE LGIKTGDIVK VTSQHGSVIR PVYVTETITP
GVVSLGEGAW IDMDEGNGVD KAGCTGILNG PIATGQGHTG YNSCNVKVEK YDKPLALDVN
WPQRIIL
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