Gene Dhaf_4628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_4628 
Symbol 
ID7261657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand+ 
Start bp4931134 
End bp4931754 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content51% 
IMG OID643564545 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002461065 
Protein GI219670630 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0000955982 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTGACA AGGAACAGAC TACTCAGCAG CGGATTCTGC AGGCCGCCCA AGAGGAATTT 
CTGCGCCTGG GCTTTCAGAA CTCTTCCCTG CGCTCCATCG CCAAGGCCTG CGGCGTAACC 
ACCGGCGCCT TATATGGATA TTACGCCGAT AAAGACGCTT TGTTTGAGGC GCTGGTCCGG 
GAAGAGGCGG AAACCCTCTA TACTATCTAC CTGCGCGCTC ATCAGGAGTT CGAAGCGCTG 
CCGCCGGAGC AGCAGCTTGC GGAGATGACT CAGCAGATCG AGCCGAGGAT ATGGAAGTGC 
TTTAATTACG TTTATGAGCA TTATGATGCC TTTAAACTGC TTATCTGCCA TGCTGAAGGG 
ACATCTTATG AAAATTATGT CCATCGTCTG GCTGAAGTGG AGGTGGAGAG CTCCACTATC 
TTTCTTTCCT GCATGGAGAA CATGGGGCGG CGGGTTACCC ATATCCCGGA TGATCTCAAT 
CATATGCTGG CCAGCGCTTA TCTGACCGGT TTTTTTGAAG TTGTCGCCCA TGATATGCCT 
AAAGAAGAGG CCCGGGAATA TATCGAACGT CTTACTGATT TTTTCAGCGC CGGTTGGAAA 
AACCTTTTGG GGCTTGTCTA G
 
Protein sequence
MVDKEQTTQQ RILQAAQEEF LRLGFQNSSL RSIAKACGVT TGALYGYYAD KDALFEALVR 
EEAETLYTIY LRAHQEFEAL PPEQQLAEMT QQIEPRIWKC FNYVYEHYDA FKLLICHAEG 
TSYENYVHRL AEVEVESSTI FLSCMENMGR RVTHIPDDLN HMLASAYLTG FFEVVAHDMP 
KEEAREYIER LTDFFSAGWK NLLGLV