Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_4566 |
Symbol | |
ID | 7261595 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 4859584 |
End bp | 4860900 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643564483 |
Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
Protein accession | YP_002461003 |
Protein GI | 219670568 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
TIGRFAM ID | [TIGR01316] glutamate synthase (NADPH), homotetrameric |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000000191225 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAGTAAGA TGATGAAATT TGAATCCGGA TTCAGTCAGG AAGAAGCTCT TGCCGAAGCC TCACGTTGTC TCCAATGCAA AAAACCCTTA TGCCGTCAAG GTTGCCCGGT GAACAATGCC ATACCCCAGT TCATCCGGGC CTTAAAAGAG GGAGAGTATG CTCAAGGTTT GGAAGCTATC TATCGCCACA GCTATTTACC GGCCGTTTGC GGCAGGGTAT GTCCTCAGGA AAAACAGTGT GAGGCAAGCT GCATTTTAGC CCGCAAGGGT AAAGCAATTC GCATTGGTAA GCTGGAGCAG TTTATTGCTG ACAACGCCAC CGAGGTAGGG TTTCCTAAAG TGGCTGCCAC CATGGGGGCC ATTGCCGTCA TTGGCTCCGG ACCGGCAGGT TTAGCGGCGG CAGTCCAACT GGCCCAGCTT GGCTATGCCG TTACCATCTT CGAAGGAGAG GCAGAACCCG GGGGAGTGCT GCTCCACGGC ATACCGGAGT ATCGCTTGCC TAAGGATGTT GTACGCCGTG ATATAAAAAA GATTGAAAAC CTGGGTGTGG AATTCAGGCT CAATACTTTA GTCGGTGTGG ATCTCTTCCT GGACGATCTG TTGACCCAGG GGTATCAGGC GGTCTTTATC GGTACAGGTG CCGGGCTGCC GAAAACTCTG GAACTTCCCG GAGAGTATTT GGAAGGGGTC ATATCGGCCC TTTATGTCCT GCAGACCATC AATCTCTATA ATTCAGGCCA ATTGCCTGAG CAGGAGCTTC CGGTGGAAAA AGGAGAACAT GTGGTGGTGA TCGGTGCCGG CAATGTGGCC ATGGATGCTG CCCGCACTGC CAGCCGTTTA GGAGCGGAGG TAACCGTCCT GGCGCGCAGA GGCTTGAATG ACATGGCCGC CCGGGATATT GAGCGGGACG AGGCCATAGC CGATGGTGTT AAGATCCGCA CTTATGCGGC TCCTTTGGCC ATATTGGGAG AGGAGAATGT AACGGGCATA AAATGCGTCA ACACCATGGT GTCCCCAGCG GGTAAAGTTG TCATTAAGGA AGAGGAAAGC TTTGTTTTAC CGGCGGATAA AGTCATTTTT GCCATTGGCC AAAGGCCCTA CGCCCGGATC GTGACCACTT CCCAAGGTTT TGAGATTAAT AAGCAGGGCT TACTGATTTG CAATGAACAC GGCATGACCA CCCGGGAGGG GGTCTTTGCG GCAGGTGATG TGGTTCATGG CCCGGCTACC GTGGTCAAGG CTATGGGGGA AGGCAGACGG ATTGCCATAG AGATCCATGC CTACCTTTTA AGGAAGAAAT TGCAAAGTGC CAAGTGA
|
Protein sequence | MSKMMKFESG FSQEEALAEA SRCLQCKKPL CRQGCPVNNA IPQFIRALKE GEYAQGLEAI YRHSYLPAVC GRVCPQEKQC EASCILARKG KAIRIGKLEQ FIADNATEVG FPKVAATMGA IAVIGSGPAG LAAAVQLAQL GYAVTIFEGE AEPGGVLLHG IPEYRLPKDV VRRDIKKIEN LGVEFRLNTL VGVDLFLDDL LTQGYQAVFI GTGAGLPKTL ELPGEYLEGV ISALYVLQTI NLYNSGQLPE QELPVEKGEH VVVIGAGNVA MDAARTASRL GAEVTVLARR GLNDMAARDI ERDEAIADGV KIRTYAAPLA ILGEENVTGI KCVNTMVSPA GKVVIKEEES FVLPADKVIF AIGQRPYARI VTTSQGFEIN KQGLLICNEH GMTTREGVFA AGDVVHGPAT VVKAMGEGRR IAIEIHAYLL RKKLQSAK
|
| |