Gene Dhaf_4566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_4566 
Symbol 
ID7261595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp4859584 
End bp4860900 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content53% 
IMG OID643564483 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_002461003 
Protein GI219670568 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases 
TIGRFAM ID[TIGR01316] glutamate synthase (NADPH), homotetrameric 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000191225 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTAAGA TGATGAAATT TGAATCCGGA TTCAGTCAGG AAGAAGCTCT TGCCGAAGCC 
TCACGTTGTC TCCAATGCAA AAAACCCTTA TGCCGTCAAG GTTGCCCGGT GAACAATGCC
ATACCCCAGT TCATCCGGGC CTTAAAAGAG GGAGAGTATG CTCAAGGTTT GGAAGCTATC
TATCGCCACA GCTATTTACC GGCCGTTTGC GGCAGGGTAT GTCCTCAGGA AAAACAGTGT
GAGGCAAGCT GCATTTTAGC CCGCAAGGGT AAAGCAATTC GCATTGGTAA GCTGGAGCAG
TTTATTGCTG ACAACGCCAC CGAGGTAGGG TTTCCTAAAG TGGCTGCCAC CATGGGGGCC
ATTGCCGTCA TTGGCTCCGG ACCGGCAGGT TTAGCGGCGG CAGTCCAACT GGCCCAGCTT
GGCTATGCCG TTACCATCTT CGAAGGAGAG GCAGAACCCG GGGGAGTGCT GCTCCACGGC
ATACCGGAGT ATCGCTTGCC TAAGGATGTT GTACGCCGTG ATATAAAAAA GATTGAAAAC
CTGGGTGTGG AATTCAGGCT CAATACTTTA GTCGGTGTGG ATCTCTTCCT GGACGATCTG
TTGACCCAGG GGTATCAGGC GGTCTTTATC GGTACAGGTG CCGGGCTGCC GAAAACTCTG
GAACTTCCCG GAGAGTATTT GGAAGGGGTC ATATCGGCCC TTTATGTCCT GCAGACCATC
AATCTCTATA ATTCAGGCCA ATTGCCTGAG CAGGAGCTTC CGGTGGAAAA AGGAGAACAT
GTGGTGGTGA TCGGTGCCGG CAATGTGGCC ATGGATGCTG CCCGCACTGC CAGCCGTTTA
GGAGCGGAGG TAACCGTCCT GGCGCGCAGA GGCTTGAATG ACATGGCCGC CCGGGATATT
GAGCGGGACG AGGCCATAGC CGATGGTGTT AAGATCCGCA CTTATGCGGC TCCTTTGGCC
ATATTGGGAG AGGAGAATGT AACGGGCATA AAATGCGTCA ACACCATGGT GTCCCCAGCG
GGTAAAGTTG TCATTAAGGA AGAGGAAAGC TTTGTTTTAC CGGCGGATAA AGTCATTTTT
GCCATTGGCC AAAGGCCCTA CGCCCGGATC GTGACCACTT CCCAAGGTTT TGAGATTAAT
AAGCAGGGCT TACTGATTTG CAATGAACAC GGCATGACCA CCCGGGAGGG GGTCTTTGCG
GCAGGTGATG TGGTTCATGG CCCGGCTACC GTGGTCAAGG CTATGGGGGA AGGCAGACGG
ATTGCCATAG AGATCCATGC CTACCTTTTA AGGAAGAAAT TGCAAAGTGC CAAGTGA
 
Protein sequence
MSKMMKFESG FSQEEALAEA SRCLQCKKPL CRQGCPVNNA IPQFIRALKE GEYAQGLEAI 
YRHSYLPAVC GRVCPQEKQC EASCILARKG KAIRIGKLEQ FIADNATEVG FPKVAATMGA
IAVIGSGPAG LAAAVQLAQL GYAVTIFEGE AEPGGVLLHG IPEYRLPKDV VRRDIKKIEN
LGVEFRLNTL VGVDLFLDDL LTQGYQAVFI GTGAGLPKTL ELPGEYLEGV ISALYVLQTI
NLYNSGQLPE QELPVEKGEH VVVIGAGNVA MDAARTASRL GAEVTVLARR GLNDMAARDI
ERDEAIADGV KIRTYAAPLA ILGEENVTGI KCVNTMVSPA GKVVIKEEES FVLPADKVIF
AIGQRPYARI VTTSQGFEIN KQGLLICNEH GMTTREGVFA AGDVVHGPAT VVKAMGEGRR
IAIEIHAYLL RKKLQSAK