| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4564 |
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| Symbol | |
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| ID | 7261593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 4855219 |
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| End bp | 4856454 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 643564481 |
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| Product | L,L-diaminopimelate aminotransferase |
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| Protein accession | YP_002461001 |
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| Protein GI | 219670566 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | [TIGR03542] LL-diaminopimelate aminotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000000273776 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTCAGA TCAATGAGAA TTACTTAAAG CTGCCGGGGA GTTATTTGTT TTCGGAAATA
GCACGGAGAG TCAATGAATT TAAGGTTCAA AATCCTGATG CGGATATTAT CCGCCTGGGA
ATCGGTGATG TGACGAGACC CCTTGCTCCC GTCGTTGTCG AAGCCATGAA GCAGGCTGTG
GAGGAGATGG GCAGGGCGGA GACTTTCCGG GGATACGGCC CTGAGCAAGG GTATGATTTT
TTGATTGAGA AGATCATTGC CAATGATTAT GCCCCTCGGG GAGTTCAGCT GGGAATGGAT
GAAGTCTTTG TCAGTGACGG TGCCAAAAGC GATACAGCCA ATTTCCAGGA GATCTTTGGC
GTGGATAATA TCATGGCTGT GACCGATCCG GTCTATCCCG TCTATGTCGA CAGCAATGTC
ATGGCGGGAA GAACAGGGAA CTATGATACA GAGAAAGGGC AGTATGGCAG AATTATCTAT
CTGCCCTGTA CTGAAGAAGG GGACATGAAG CCTGAATTGC CCACGGCACC TGTGGATATG
ATCTACCTTT GCTTCCCCAA CAATCCCACG GGAATGACCT TGACCAAAGA AGAACTGAAG
GTATGGGTGG ATTATGCGCG GGAAAATAAG GCCATCATTC TTTTTGACTC CGCCTATGAG
GCCTTCATCC GGGAAGAAGG AGTGCCCCGC AGCATTTACG AAGTAGAAGG AGCGCGCGAA
GTGGCTGTAG AATTCCGCAG CTTCTCCAAA ACCGCAGGCT TTACCGGAAC CCGCTGCGCT
TATACTGTCG TTCCTAAGGA TATTATGATC TATGACTCCA CAGGCGAAGG ACATAGCTTG
AATAAACTTT GGCTGAGAAG ACAGACCACC AAGTTCAACG GAGTCTCCTA CCCTGTCCAA
GCGGGAGCCG CAGCTGTCTA TACTGAGGAA GGAAAAAAAC AGATCCAGGC CACCATCGAT
TATTATATGG AAAATGCCCG TATCATCCGG GAAGGCCTCC AGGAAGCCGG CTTTAAAGTC
TTTGGCGGCG TAAACGCCCC CTATATCTGG ATGAAGACCC CCGGCACTAT GGGATCCTGG
GAGTTTTTTG ATAAACTGAT GACAGAAGCC CATGTGGTCG GCACCCCCGG TGCAGGTTTC
GGAGCCAACG GTGAAGGATT CTTCCGCCTC ACAGCCTTTG GAACCCGTGA GAATACCGAA
AAAGCTATCG AGCGCATTAA AGCTCGGATG AAGTAA
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| Protein sequence | MAQINENYLK LPGSYLFSEI ARRVNEFKVQ NPDADIIRLG IGDVTRPLAP VVVEAMKQAV
EEMGRAETFR GYGPEQGYDF LIEKIIANDY APRGVQLGMD EVFVSDGAKS DTANFQEIFG
VDNIMAVTDP VYPVYVDSNV MAGRTGNYDT EKGQYGRIIY LPCTEEGDMK PELPTAPVDM
IYLCFPNNPT GMTLTKEELK VWVDYARENK AIILFDSAYE AFIREEGVPR SIYEVEGARE
VAVEFRSFSK TAGFTGTRCA YTVVPKDIMI YDSTGEGHSL NKLWLRRQTT KFNGVSYPVQ
AGAAAVYTEE GKKQIQATID YYMENARIIR EGLQEAGFKV FGGVNAPYIW MKTPGTMGSW
EFFDKLMTEA HVVGTPGAGF GANGEGFFRL TAFGTRENTE KAIERIKARM K
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