Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_4554 |
Symbol | |
ID | 7261583 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 4846493 |
End bp | 4847488 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643564471 |
Product | diguanylate cyclase with PAS/PAC sensor |
Protein accession | YP_002460991 |
Protein GI | 219670556 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTTATG GGCTTATCAT CGTTTTGATG ATTATCCTTG GCATCGGCTT ATGGCATACT AAAAAGTATC ACCGGGCCGT GGTCAACCAG GTTGCTCACG TATGGATTAC GAAAAATGCC TTTGAACACA CGGCGTTAGG GATGGCGATA GTCAGCCCTG ATTGCCGTTT CCTGAAAGTC AACCGGGCCT ATGGGGAGAT TACCGGCTAT ACGCGGCCAG AGTTGTTGAA GATGGCTGTT AAAGAACTGA CTCACCCGGA AGATCAGGAA AAAGATACTC CCTACCTTCA AGAAGTTTTT GCCGGCAATA TCCATTCCTT TACCACGGTT AAGCGCTATA TCCATAAAAA TGGCAGCACC ATTTGGGTCA GATCAACTAT TTCCGCCGTC CGCACCGAAC GGGGCAACCT CAAGTATTTT GTCGCCCAGA TCCAGGATAT GACCATTGCC AAAAATGCCG AGGATGAGCT GCGTAAGTCC CGGGATAATG CTGAAGTCCT GGCCCGTACC GATTATCTGA CCAAGACCCT GAACCGCAGG GCTTTTATCG AACGGCTTCA GGAAGAGTTG GAACGAACCA AGCGCACTCA GGAAGGCTTT GCTATGATCT TGGTCGATAT TGACTATTTC AAGAAAGTCA ACGACCAATT TGGGCATCTG GCAGGAGATT ATGTTCTTCA GAAATTTGCG GATTGCTTAA GCAATAACGT AAGGCCTTAT GATTTTATAG GGCGTTACGG AGGAGAAGAG TTCATTATTT GTCTGCCGGA TACCGATGTT GAGCAGGCTG CCCTGGTGGC GGAACGCATG AGGGAAAGTG TGGAAGCCCT TGAGGTAGAT TATCTGCATG CCCAGATTAA AGTCACAGGC AGCTTTGGAG TAGCGGTTTA CGACAGCCAT TCCTCCGATA CTCTTGACGA GCTCATAGAA AAAGCCGATG GGGCCATGTA TGTGGCCAAG AACCATAAAA ACACGGTCTA TCAGTGGGTG TCATAA
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Protein sequence | MSYGLIIVLM IILGIGLWHT KKYHRAVVNQ VAHVWITKNA FEHTALGMAI VSPDCRFLKV NRAYGEITGY TRPELLKMAV KELTHPEDQE KDTPYLQEVF AGNIHSFTTV KRYIHKNGST IWVRSTISAV RTERGNLKYF VAQIQDMTIA KNAEDELRKS RDNAEVLART DYLTKTLNRR AFIERLQEEL ERTKRTQEGF AMILVDIDYF KKVNDQFGHL AGDYVLQKFA DCLSNNVRPY DFIGRYGGEE FIICLPDTDV EQAALVAERM RESVEALEVD YLHAQIKVTG SFGVAVYDSH SSDTLDELIE KADGAMYVAK NHKNTVYQWV S
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