Gene Dhaf_4471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_4471 
Symbol 
ID7261500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand- 
Start bp4744688 
End bp4745248 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content42% 
IMG OID643564389 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_002460909 
Protein GI219670474 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID[TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0213562 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGTTA TAAAGACTGA TGTCTTAGAT GTCTATATCA TAGAACCCAA AGTTTTTGGA 
GATCATCGGG GTTGGTTCAT GGAAGCCTGG TCAATCCAGA AAATGAAAGA AGCAGGGCTT 
GAGTATGATT TTGTCCAGGA TAATCATTCC TTCTCTGCCC AAAAAGGGAC TTTACGCGGG 
TTGCATTTTC AAAAAGGGGA TGCTGCGCAA ACGAAGTTGG TCCGTTGCAG CAGAGGGGCG 
GTCCTGGACG TTGCCGTAGA TTTGCGGAAG GGTTCACCTA CTTATAAAAA ATGGGTAGCT 
GTAGAATTAT CGGCTGAAAA TAAAAGACAA CTACTAATAC CGCGGGGGAT GGCGCATGCT 
TTTTTGACCC TGACTGATAA TGTGGAATTC TTATATAAAG CGGATAACTT CTATTGTCCA 
GAGGCCGATA GAAGTATTAT TTGGAATGAT CCGGAGATTA ACGTGACTTG GGGAATAGAA 
AATCCGATTG TATCTGAAAA GGATGCTAGT GCACCATGTC TACGAAATAG TGATATAGAC 
TTTGTTTATG AGGAGAAGTA G
 
Protein sequence
MKVIKTDVLD VYIIEPKVFG DHRGWFMEAW SIQKMKEAGL EYDFVQDNHS FSAQKGTLRG 
LHFQKGDAAQ TKLVRCSRGA VLDVAVDLRK GSPTYKKWVA VELSAENKRQ LLIPRGMAHA 
FLTLTDNVEF LYKADNFYCP EADRSIIWND PEINVTWGIE NPIVSEKDAS APCLRNSDID 
FVYEEK