Gene Dhaf_4397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_4397 
Symbol 
ID7261426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp4668259 
End bp4669128 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content51% 
IMG OID643564318 
Productfumarate hydratase 
Protein accessionYP_002460838 
Protein GI219670403 
COG category[C] Energy production and conversion 
COG ID[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain 
TIGRFAM ID[TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0277035 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCAAAGG TTATCCATGT GGATCAGATT GTTGAGGCAG TGGAAGAGCT TTGTATCGGA 
GCCAATTATG ATCTCGGTGA CGATATGATG CTGAAGTTCA GGGAGGCTTT GCAAACTGAA
GAATCTCCCT TGGGCTGTGA AGTATTTGAG AGGTTAATCG AAAACGCCAC CATTGCTCAT
GAGGAGCGGG TTCCCATGTG CCAGGATACG GGCATGACGG TGATCTTTGT GGAGTTGGGG
CAGGAGGTTA TGATCACCGG CGGAGCTTTA AAGGATGCTT TGAATGAGGG CGTTCGGCGC
GGGTATGAAA AGGGATACCT GCGTAAATCG ATGGTGAAGG ATCCCTTTGA CCGGGTGAAT
ACCGGGGACA ACACACCGGC GATTATCCAT TATGACATCG TGCCCGGAGA TCAATTGAAG
ATTACCGTTG CCCCCAAAGG AGCAGGCAGT GAGAACATGG GTGCTCTGAA AATGTGTAAG
CCATCGGAAG GCTTGGAGGG AGCTATACAA TTTGTGGTGG ATACGGTGGA GAAGGCCGGG
GGAAATCCCT GCCCTCCCAT TATCGTAGGC GTAGGTGTAG GCGGAAGCAT GGAGAAAGCC
ACTTATCTGG CGAAAAAGTC CCTCCTGCGC CAAGTGGGGG AACCCAATGC AGAAAAACGT
CTGGCGGATA TCGAGCAAGA GATACTGAAA AGGGTGAACA AGCTGGGAAT CGGCCCTCAA
GGGTTTGGGG GTACGAATAC TGCTCTCGGC GTTCATTTGG AAGTTTATCC CACCCATATT
GCCTCCCTGC CCGTTGCGGT AAATATCCAA TGTCATGCAG CCCGCCATCA AGAAGTTGTC
TTAAAGGGCA GACAAGAAGG GGAGGAATGA
 
Protein sequence
MPKVIHVDQI VEAVEELCIG ANYDLGDDMM LKFREALQTE ESPLGCEVFE RLIENATIAH 
EERVPMCQDT GMTVIFVELG QEVMITGGAL KDALNEGVRR GYEKGYLRKS MVKDPFDRVN
TGDNTPAIIH YDIVPGDQLK ITVAPKGAGS ENMGALKMCK PSEGLEGAIQ FVVDTVEKAG
GNPCPPIIVG VGVGGSMEKA TYLAKKSLLR QVGEPNAEKR LADIEQEILK RVNKLGIGPQ
GFGGTNTALG VHLEVYPTHI ASLPVAVNIQ CHAARHQEVV LKGRQEGEE