Gene Dhaf_4396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_4396 
Symbol 
ID7261425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand- 
Start bp4667699 
End bp4668256 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content55% 
IMG OID643564317 
Producthydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit 
Protein accessionYP_002460837 
Protein GI219670402 
COG category[C] Energy production and conversion 
COG ID[COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain 
TIGRFAM ID[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.258526 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAAA CATTTCGTCT GGAACTTCCC CTGACCCAGG ACAAAGTGGC TCATCTCAAA 
GCGGGGGATA GTCTGCTGCT TAGCGGCGTG ATCTATACCG GCCGTGACGC CGCCCATAAA 
AAGATGGTGG AGGCTTTATC CCGGGGGGAG GAGCTTCCCT TTGATGTACA CAATCAGGTG 
ATCTACTTTG TGGGTCCCAC CCCGCCTAAA CCGGGTCAGG TTATCGGCTC AGCGGGCCCC 
ACCACCAGTG GCCGGATGGA TGCTTATTCC CCTATGCTGA TTGAACGGGG GCTGACCGGC 
ATGATTGGCA AAGGATTGCG CTCTGAAGAA GTGATCAGTG CCATGAAGAA GCATGGCGCG 
GTTTATTTCG GAGCCATCGG AGGTTCCGGA GCGCTGTTGG CGAAGCGGAT TATTTCAGCA 
GAGGTTATCG CTTATCCGGA ACTGGGACCG GAAGCCATCC GCAGGCTGGA GGTCAAGGAT 
TTCCCGGTGA TGGTGGTCAT TGATAAGCAT GGCAATAACC TTTACGAGTC AGGAAAGGCC 
CAGTATCGGC AAGAGTAA
 
Protein sequence
MSETFRLELP LTQDKVAHLK AGDSLLLSGV IYTGRDAAHK KMVEALSRGE ELPFDVHNQV 
IYFVGPTPPK PGQVIGSAGP TTSGRMDAYS PMLIERGLTG MIGKGLRSEE VISAMKKHGA 
VYFGAIGGSG ALLAKRIISA EVIAYPELGP EAIRRLEVKD FPVMVVIDKH GNNLYESGKA 
QYRQE