Gene Dhaf_4378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_4378 
Symbol 
ID7261403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp4646758 
End bp4648038 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content46% 
IMG OID643564295 
Producttrigger factor 
Protein accessionYP_002460819 
Protein GI219670384 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) 
TIGRFAM ID[TIGR00115] trigger factor 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.000799754 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGTCA AAATGGAGAA AATAGAGAAG AATACTGTTG AACTTGAAGT TACCGTCGAT 
GCGAAGGTAT TCAGTGCCGC AGTAACCAAA GCTGCCAAAG CTTTAGCTAA CAAAGTGAAT
ATCCCGGGTT TCCGTAAAGG AAAAGCTCCA CGGACCATGG TTGAGCGTTA CGTGGGAACG
GCTGCACTTT ATAATGATGC AGTGGATGAC ATCCTCGGTG TTGAGTACAT GAAAGCGGTT
AATGAAGCTG GGATTGAACC GGTAGATCGC CCGGACGTGG ATCTCATCCA AATGGAAGAT
GGCAAAGAGC TTGTTTTCAA GGCGAAGGTC ACTGTGAAGC CTGAAGTCGA GTTGGGAAGC
TACAAGGGTC TGGAAGTTGA AAAGACTGCG GCTGTCGTTA CCGATGAGGA GCTTGAACAA
GAGCTCCAGC GCAAGCAGGA ACAACACGCC AAAGTTCTTA ATCTCGAAGA AGGCACAGTT
CAAGCTCAGG ATACCGTGAA TATCGACTTC GCCGGTTCTG TGGATGGGGT GGCTTTCGAA
GGCGGAACAG CTGAAGGGTA CGATTTGGTT ATCGGATCCG GCTCCTTTAT CCCAGGATTT
GAAGAACAAT TGATCGGCGC ACAAATTGGA CAGGAAGTTG ATGTCAACGT TCGCTTCCCT
GATGAATATC ATGTTGCAGA CCTACAAGGT AAGGATGCTT TGTTCAAAGT TAAGGTCAAC
AAGCTGAAGA GAAAAGAGTA TGCACCTTTG GATGATGAAT TCGCCAAAGA TATCAGCGAA
TTTGAGACAC TTGATGAATT GAAAGCTGAT TTGAGAGACA AACTTATGAC AGCGGCAGAA
CAACGTGCAG AAATGGAACA CAAAAATGCA ATCGTTGCCA AAGCTGTAGA AAATGCCAGT
GTCGAGATTC CGGAGGCCAT GGTGAACAGC CGGATTGACA TGATGCTCGA TGACATGGCG
CAAAATCTTT CGTATCAAGG GCTGGATTTA GAAACCTATT GCCACTATAC GGGAACCAGT
ATGGATACCA TGAGAGAAGA ACTTCGCCCC CGTGCTTCGG AAAACCTTAA AACCGAACTT
GTTTTAGAAG CTATCGCTAA GGTAGAAGGA ATTACAGTAT CCGAGGAAGA ATTAAACAAT
GAGTTGGCAA AACTTGCAGA ACGTTATCAA ACCAGTCCGG AAAATTTGAA ACAGGCCCTC
ATGGCACGTG GTGATATGGG CATGTATCGT CAGAGCTTAG TTTCCGAAAA AACGGTAAAC
TTCCTCGTCG AGCAGGCATA G
 
Protein sequence
MSVKMEKIEK NTVELEVTVD AKVFSAAVTK AAKALANKVN IPGFRKGKAP RTMVERYVGT 
AALYNDAVDD ILGVEYMKAV NEAGIEPVDR PDVDLIQMED GKELVFKAKV TVKPEVELGS
YKGLEVEKTA AVVTDEELEQ ELQRKQEQHA KVLNLEEGTV QAQDTVNIDF AGSVDGVAFE
GGTAEGYDLV IGSGSFIPGF EEQLIGAQIG QEVDVNVRFP DEYHVADLQG KDALFKVKVN
KLKRKEYAPL DDEFAKDISE FETLDELKAD LRDKLMTAAE QRAEMEHKNA IVAKAVENAS
VEIPEAMVNS RIDMMLDDMA QNLSYQGLDL ETYCHYTGTS MDTMREELRP RASENLKTEL
VLEAIAKVEG ITVSEEELNN ELAKLAERYQ TSPENLKQAL MARGDMGMYR QSLVSEKTVN
FLVEQA