Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_4378 |
Symbol | |
ID | 7261403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 4646758 |
End bp | 4648038 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 643564295 |
Product | trigger factor |
Protein accession | YP_002460819 |
Protein GI | 219670384 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
TIGRFAM ID | [TIGR00115] trigger factor |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.000799754 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGTCA AAATGGAGAA AATAGAGAAG AATACTGTTG AACTTGAAGT TACCGTCGAT GCGAAGGTAT TCAGTGCCGC AGTAACCAAA GCTGCCAAAG CTTTAGCTAA CAAAGTGAAT ATCCCGGGTT TCCGTAAAGG AAAAGCTCCA CGGACCATGG TTGAGCGTTA CGTGGGAACG GCTGCACTTT ATAATGATGC AGTGGATGAC ATCCTCGGTG TTGAGTACAT GAAAGCGGTT AATGAAGCTG GGATTGAACC GGTAGATCGC CCGGACGTGG ATCTCATCCA AATGGAAGAT GGCAAAGAGC TTGTTTTCAA GGCGAAGGTC ACTGTGAAGC CTGAAGTCGA GTTGGGAAGC TACAAGGGTC TGGAAGTTGA AAAGACTGCG GCTGTCGTTA CCGATGAGGA GCTTGAACAA GAGCTCCAGC GCAAGCAGGA ACAACACGCC AAAGTTCTTA ATCTCGAAGA AGGCACAGTT CAAGCTCAGG ATACCGTGAA TATCGACTTC GCCGGTTCTG TGGATGGGGT GGCTTTCGAA GGCGGAACAG CTGAAGGGTA CGATTTGGTT ATCGGATCCG GCTCCTTTAT CCCAGGATTT GAAGAACAAT TGATCGGCGC ACAAATTGGA CAGGAAGTTG ATGTCAACGT TCGCTTCCCT GATGAATATC ATGTTGCAGA CCTACAAGGT AAGGATGCTT TGTTCAAAGT TAAGGTCAAC AAGCTGAAGA GAAAAGAGTA TGCACCTTTG GATGATGAAT TCGCCAAAGA TATCAGCGAA TTTGAGACAC TTGATGAATT GAAAGCTGAT TTGAGAGACA AACTTATGAC AGCGGCAGAA CAACGTGCAG AAATGGAACA CAAAAATGCA ATCGTTGCCA AAGCTGTAGA AAATGCCAGT GTCGAGATTC CGGAGGCCAT GGTGAACAGC CGGATTGACA TGATGCTCGA TGACATGGCG CAAAATCTTT CGTATCAAGG GCTGGATTTA GAAACCTATT GCCACTATAC GGGAACCAGT ATGGATACCA TGAGAGAAGA ACTTCGCCCC CGTGCTTCGG AAAACCTTAA AACCGAACTT GTTTTAGAAG CTATCGCTAA GGTAGAAGGA ATTACAGTAT CCGAGGAAGA ATTAAACAAT GAGTTGGCAA AACTTGCAGA ACGTTATCAA ACCAGTCCGG AAAATTTGAA ACAGGCCCTC ATGGCACGTG GTGATATGGG CATGTATCGT CAGAGCTTAG TTTCCGAAAA AACGGTAAAC TTCCTCGTCG AGCAGGCATA G
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Protein sequence | MSVKMEKIEK NTVELEVTVD AKVFSAAVTK AAKALANKVN IPGFRKGKAP RTMVERYVGT AALYNDAVDD ILGVEYMKAV NEAGIEPVDR PDVDLIQMED GKELVFKAKV TVKPEVELGS YKGLEVEKTA AVVTDEELEQ ELQRKQEQHA KVLNLEEGTV QAQDTVNIDF AGSVDGVAFE GGTAEGYDLV IGSGSFIPGF EEQLIGAQIG QEVDVNVRFP DEYHVADLQG KDALFKVKVN KLKRKEYAPL DDEFAKDISE FETLDELKAD LRDKLMTAAE QRAEMEHKNA IVAKAVENAS VEIPEAMVNS RIDMMLDDMA QNLSYQGLDL ETYCHYTGTS MDTMREELRP RASENLKTEL VLEAIAKVEG ITVSEEELNN ELAKLAERYQ TSPENLKQAL MARGDMGMYR QSLVSEKTVN FLVEQA
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