Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_4352 |
Symbol | radC |
ID | 7261377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 4615099 |
End bp | 4615782 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643564269 |
Product | DNA repair protein RadC |
Protein accession | YP_002460793 |
Protein GI | 219670358 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2003] DNA repair proteins |
TIGRFAM ID | [TIGR00608] DNA repair protein radc |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0000113857 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTACC GTCGGTTAAA GGATCTACCT GAGGAATTAT TACCTCGTGA ACGGTTGTTT CAATATGGAG CAGATGCCCT CTCTAATCGG GAAATTCTGG CCATTTTGTT GAGGACTGGG GTCAAAGGAG AGAATGTCCT GGATTTTTCA GAACGCCTTT TGACTGAAAC GGGAGGGTTA TCAGGATTAG CTCGCTTAAC GGTTCATGAG TTGACCCGGT ATCGTGGTAT GGGAACGGCT AAAGCGGCTG AACTAAAGGC GGCATTGGAA TTGGGGCGGC GTTCAGTATC TTCGGATCCC TTGGTACGCC CTGTGATCAA TTCTCCTCAA GACATAGCCC ATTTGGTCAT GGAAGAAATG CGCTATCTGG ATCGAGAGCA TTTCCGGGTC GTGAGTCTAT CGACCAAGAA CCATGTGCTG GGGATCAGTT CCATTTCCGT AGGCTCTTTG AATTCTTCTT TGGTACATCC CCGGGAGTGC TTTAAAGAGG CCATCCGGCG TAATTCCAAT GCGATTATCC TTTTGCACAA TCATCCCAGT GGGGACCCGA CCCCCAGTAG TGAAGATATT GATGTAACCC GTAGATTATC CGATGGGGGG CAGATTCTGG GTATCGAAGT CCTTGATCAT GTCATTATCG GAGACAATCG GTACATAAGC TTGAAAGAAC GAGGAATATT ATAG
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Protein sequence | MDYRRLKDLP EELLPRERLF QYGADALSNR EILAILLRTG VKGENVLDFS ERLLTETGGL SGLARLTVHE LTRYRGMGTA KAAELKAALE LGRRSVSSDP LVRPVINSPQ DIAHLVMEEM RYLDREHFRV VSLSTKNHVL GISSISVGSL NSSLVHPREC FKEAIRRNSN AIILLHNHPS GDPTPSSEDI DVTRRLSDGG QILGIEVLDH VIIGDNRYIS LKERGIL
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