Gene Dhaf_4352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_4352 
SymbolradC 
ID7261377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp4615099 
End bp4615782 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content48% 
IMG OID643564269 
ProductDNA repair protein RadC 
Protein accessionYP_002460793 
Protein GI219670358 
COG category[L] Replication, recombination and repair 
COG ID[COG2003] DNA repair proteins 
TIGRFAM ID[TIGR00608] DNA repair protein radc 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0000113857 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTACC GTCGGTTAAA GGATCTACCT GAGGAATTAT TACCTCGTGA ACGGTTGTTT 
CAATATGGAG CAGATGCCCT CTCTAATCGG GAAATTCTGG CCATTTTGTT GAGGACTGGG
GTCAAAGGAG AGAATGTCCT GGATTTTTCA GAACGCCTTT TGACTGAAAC GGGAGGGTTA
TCAGGATTAG CTCGCTTAAC GGTTCATGAG TTGACCCGGT ATCGTGGTAT GGGAACGGCT
AAAGCGGCTG AACTAAAGGC GGCATTGGAA TTGGGGCGGC GTTCAGTATC TTCGGATCCC
TTGGTACGCC CTGTGATCAA TTCTCCTCAA GACATAGCCC ATTTGGTCAT GGAAGAAATG
CGCTATCTGG ATCGAGAGCA TTTCCGGGTC GTGAGTCTAT CGACCAAGAA CCATGTGCTG
GGGATCAGTT CCATTTCCGT AGGCTCTTTG AATTCTTCTT TGGTACATCC CCGGGAGTGC
TTTAAAGAGG CCATCCGGCG TAATTCCAAT GCGATTATCC TTTTGCACAA TCATCCCAGT
GGGGACCCGA CCCCCAGTAG TGAAGATATT GATGTAACCC GTAGATTATC CGATGGGGGG
CAGATTCTGG GTATCGAAGT CCTTGATCAT GTCATTATCG GAGACAATCG GTACATAAGC
TTGAAAGAAC GAGGAATATT ATAG
 
Protein sequence
MDYRRLKDLP EELLPRERLF QYGADALSNR EILAILLRTG VKGENVLDFS ERLLTETGGL 
SGLARLTVHE LTRYRGMGTA KAAELKAALE LGRRSVSSDP LVRPVINSPQ DIAHLVMEEM
RYLDREHFRV VSLSTKNHVL GISSISVGSL NSSLVHPREC FKEAIRRNSN AIILLHNHPS
GDPTPSSEDI DVTRRLSDGG QILGIEVLDH VIIGDNRYIS LKERGIL