| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4302 |
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| Symbol | |
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| ID | 7261327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 4553324 |
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| End bp | 4553992 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 643564219 |
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| Product | sortase family protein |
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| Protein accession | YP_002460743 |
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| Protein GI | 219670308 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3764] Sortase (surface protein transpeptidase) |
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| TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0000168018 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCGAAGA AAATTAGCTC CATCATCTTC ATCGTGGCAG GACTCACTCT GCTGGCCTAT
CCCAAGGCAG CGGAAATGCA CAGCACCTAT CTGCAGAAAA AGCTGGTCAG CGAATGGCAA
GCAGCCCTTG CCGCTGTGGA TCAAGGAGAA CGAGCCGCTG ACCCGGCCCC TGATCAGGAT
GCTGAAGAAA GCAGCCCGGC GAAAGAGTCG CCGGGTGATT TGCCGGAAGA GTTCATCACT
CCGGAAGAAA AAGACAGACA AGATTATATA CACGACACGA TGGAAGGAAT GCTCAAGATC
GAGAAGATCG GCCTTGAGCT GCCCATCCTC AAAGGTGTAA CCGAAGCAAA CCTGGATCTA
TCGGTAGCTC ATATGGAGAA CACCGGGAAC ATGGGTGAGC CGGGCAATTA CGCCATAGCC
GGTCATCGAA GCCATACTTA TGGCCGGCAA TTCAACAGGC TGGAGGAAGT CAATCCGGGA
GACCGGCTGG AAGTAACCGA TGGGAAGACT ACCTATACCT ACACCGTAAC CCAAAAATTA
TATGTTGACC CCACGGAAAC CTACGTTCTT AACAGCAATA AGGATATCAG CGAAATAACC
CTCATTACCT GTCACCCCAT GATCAACCCG ACTCACAGGC TGATCATTAA AGGAGTATTA
GGGGGGTGA
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| Protein sequence | MSKKISSIIF IVAGLTLLAY PKAAEMHSTY LQKKLVSEWQ AALAAVDQGE RAADPAPDQD
AEESSPAKES PGDLPEEFIT PEEKDRQDYI HDTMEGMLKI EKIGLELPIL KGVTEANLDL
SVAHMENTGN MGEPGNYAIA GHRSHTYGRQ FNRLEEVNPG DRLEVTDGKT TYTYTVTQKL
YVDPTETYVL NSNKDISEIT LITCHPMINP THRLIIKGVL GG
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