| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4295 |
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| Symbol | |
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| ID | 7261320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 4545090 |
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| End bp | 4546409 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 643564212 |
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| Product | RNA modification enzyme, MiaB family |
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| Protein accession | YP_002460736 |
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| Protein GI | 219670301 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01579] MiaB-like tRNA modifying enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00281289 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTACAT TACAGCAAAA AAATCCAGCG TCGGTGTGTT TTGTTACCCT TGGGTGCAAA
GTGAATCAGA CCGAGAGTGA GGCCTTAGGG CAGCTGTTTC GAAATAACGG CTATCATGTG
GTGTCTTCCA CAGAGAAGGC GGATGTGGTG GTGGTCAATA CATGCACCGT GACCAATACC
GGGGGTGCTA AGTCCCGGCA AACCATCCGG CGTATGGTCA AGGCTCATCC TGACGCTTTC
GTGGTGGTTA TGGGGTGTTA TGCTCAGACC GCCCCGGGAG AAATCCTCGG AATTGCGGGA
GTCGATCTGG TCTTAGGAAC CCAGGATCGG GGAAAGATCC TGGAACTGAT TGATCAGGTG
AAAAAGGAAC AGCAGCCCAA GAGCAGCGTC CGCACCATCT GGGATGCGAA AACCTTTGAA
GAACTGCCCT TGATCGAAGA GGAAAGCAGG ACAAGGGCGA CCTTAAAAAT CCAGGAGGGG
TGTAATCAAT TTTGCACCTA TTGCATTATC CCTTATGCCC GGGGACCGGT CAGAAGCAGA
ATCCCTGAGA ATGCCGTCAC AGAGGCGGAA AAGCTGGTTG CGGCAGGGTA TAAAGAGATC
GTGTTGACAG GAATTCATAC AGGGTCTTAT GGAGAGGATC TGGGAGAGGA TTGGGATTTG
GCCCGGCTGG TCAAGGCGCT TGCTCAGATT AAAGGGCTGC ACCGTTTGCG CTTGAGTTCT
ATTGAACCTA TGGAATTTAC CCCTGAACTG ATCGATGTGA TCATCAATTA TCCCGCGGTC
TGCCCCCACC TGCATATTCC TTTGCAATGC GGCAGCGATG CCATTTTAAC TCGCATGAAA
AGACCTTATA CTGTAAAGGA GTTCAAAGAG CTCATTCAAC GCTTAACGAG CCTGCAGCCG
GGGATTGCCA TTACCACGGA CGTGATCGTT GGTTTTCCGG GGGAGACGGA GCAAAATTTT
CAGGAGACGC TGGAGACAGT TCGTTCCTGC GGTTTTTCCG GAATTCATGT CTTTCCTTAT
TCCAAGCGCG AAGGAACTCC TGCTGCCAAG TATCCTGAGC AGATCCCCAA CAAAATCAAA
GAGGAACGTG TCAAAGCTCT CCTGGAAGTG GCCAGAGAGA GCCAGGAAGA CTATGTCCGC
AGATTTATCG GGCAGAGGGT GGAAGTCTTG ATCGAGCGGG TCAGTCCGGA AGGAGTAGCG
GCAGGTCATA CAGGGAACTA TATTCAGGTG CACTTGCCTC CCCGTGAAGG AAAACCCTGG
GAAGGCGGCG AATTGGTAGA GTGCGTACTG GAAAAAAACC ATGTGCGGGT TAATGGATAA
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| Protein sequence | MSTLQQKNPA SVCFVTLGCK VNQTESEALG QLFRNNGYHV VSSTEKADVV VVNTCTVTNT
GGAKSRQTIR RMVKAHPDAF VVVMGCYAQT APGEILGIAG VDLVLGTQDR GKILELIDQV
KKEQQPKSSV RTIWDAKTFE ELPLIEEESR TRATLKIQEG CNQFCTYCII PYARGPVRSR
IPENAVTEAE KLVAAGYKEI VLTGIHTGSY GEDLGEDWDL ARLVKALAQI KGLHRLRLSS
IEPMEFTPEL IDVIINYPAV CPHLHIPLQC GSDAILTRMK RPYTVKEFKE LIQRLTSLQP
GIAITTDVIV GFPGETEQNF QETLETVRSC GFSGIHVFPY SKREGTPAAK YPEQIPNKIK
EERVKALLEV ARESQEDYVR RFIGQRVEVL IERVSPEGVA AGHTGNYIQV HLPPREGKPW
EGGELVECVL EKNHVRVNG
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