Gene Dhaf_4274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_4274 
Symbol 
ID7261299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand- 
Start bp4525414 
End bp4526070 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content51% 
IMG OID643564191 
Productdeoxyribose-phosphate aldolase 
Protein accessionYP_002460715 
Protein GI219670280 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0274] Deoxyribose-phosphate aldolase 
TIGRFAM ID[TIGR00126] deoxyribose-phosphate aldolase 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAACAA TGAACTTAGC AGGCATGATC GATCATACAC TTCTCAAACC GGAGGCTACA 
GAAAAAGATA TTGTGAATCT ATGCCATGAA GCCAAGCAGC ACAAATTTGC CACAGTCTGT 
ATTAATCCGG CCTATATCTG CACTGCCGCC AAGCTTTTAC ACGGCAGCGG TGTGGGAGTA 
GCCACAGTCA TCGGCTTTCC TTTGGGAGCG ACCATGACGG AGATTAAAGT TCAGGAAATT 
TTCGCCGCTA AAGCACATGG TGCCCGGGAA GTGGATATCG TGATCAATAT AGGCTGGGCG 
AAATCGGGCA ATTGGGAAGC TGTGGCGAAA GATATAACAC GGGCTGTGGA AGCGGCTCAT 
TGCTGTGGTG TCACGATCAA GGTCATCATT GAGACCTCTT TGCTTACTGA AGAGGAGAAG 
CAAAAGGCGG CAGAGATCGT CAAGGCATCG GGAGCGGACT ATATCAAAAC GTCCACAGGC 
TTTGCCGGCG GCGGAGCTAC AGTGGAAGAT GTACGCAATC TGAAAGCCTG GGTGGGTCAA 
TCCGTCAAAG TGAAGGCTTC GGGAGGAATA CGTTCCCGTG AGACCGCGTT ACAGATGGTG 
GAGGCCGGAG CTGATCGCCT GGGAACGAGT TCCGGCGTGC AAATAATCAC GGTATAA
 
Protein sequence
MRTMNLAGMI DHTLLKPEAT EKDIVNLCHE AKQHKFATVC INPAYICTAA KLLHGSGVGV 
ATVIGFPLGA TMTEIKVQEI FAAKAHGARE VDIVINIGWA KSGNWEAVAK DITRAVEAAH 
CCGVTIKVII ETSLLTEEEK QKAAEIVKAS GADYIKTSTG FAGGGATVED VRNLKAWVGQ 
SVKVKASGGI RSRETALQMV EAGADRLGTS SGVQIITV