| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4184 |
|---|
| Symbol | |
|---|
| ID | 7261204 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 4431517 |
|---|
| End bp | 4432269 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 643564100 |
|---|
| Product | Cephalosporin hydroxylase |
|---|
| Protein accession | YP_002460628 |
|---|
| Protein GI | 219670193 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG3510] Cephalosporin hydroxylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTGATT ATGAAGCACA ATACATAAGA GATAAGGCAG AAAATATTCG CAAGATGAAT
ATTGACACTG CGCCCAGCCA TACCGCAAAG AAATTTATGG AAGCGGTAGG CCCGTATCAG
TATGTCAACC ATTACACGTG GATGGGACGT CCGATTATTC AGCTTCCTCA GGATATAGTA
GCCATGCAGG AAGTTATTAT GAAGGTTGCC CCAGATCTTA TTATAGAAAC GGGTATTGCT
CATGGTGGCA GTGCAGTCTT TTTTTCATCA ATGTTGGAAC TTCTAGATAT ATACGCGGGA
TGTGAGATTC CCAGAGAAGT TGTAGCTATT GATATAGAAC TGCGGTCGCA GAATCGCACA
GCACTTGAAG CACACCCAAT GTATAAGCGC ATCACAGTAT TTGACGGCTC GTCAACTGAT
TCTAAAATAG CTGAACAAGT CCGCGAAATT GCGTCACGGC ATCGTGCGAT TATGGTTGTG
TTAGATTCCA ACCACAGCCA TCAGCATGTT TATGATGAGT TAAATATTTA CGGTCAATTG
GTTACTGTTG GATCTTATGC GCTGGTTTGT GATACTTGCA TCGAGGTTTT TGGTGACACC
CGTAATGACC GGCCGTGGGG TAAGGGCAAC AACCCCTATA CGGCGGCAAA ACAGTGGCTT
AGTGAGCATG ACGAATTTGT ATGTGATAAG ACATATGACG AACAATCGTT GATTACTTCT
AATCCAGGAG GATGGCTTTT ACGAGTTAAA TGA
|
|---|
| Protein sequence | MIDYEAQYIR DKAENIRKMN IDTAPSHTAK KFMEAVGPYQ YVNHYTWMGR PIIQLPQDIV
AMQEVIMKVA PDLIIETGIA HGGSAVFFSS MLELLDIYAG CEIPREVVAI DIELRSQNRT
ALEAHPMYKR ITVFDGSSTD SKIAEQVREI ASRHRAIMVV LDSNHSHQHV YDELNIYGQL
VTVGSYALVC DTCIEVFGDT RNDRPWGKGN NPYTAAKQWL SEHDEFVCDK TYDEQSLITS
NPGGWLLRVK
|
|---|
| |