| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4142 |
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| Symbol | |
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| ID | 7261162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 4388750 |
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| End bp | 4390003 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643564058 |
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| Product | CheC, inhibitor of MCP methylation / FliN fusion protein |
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| Protein accession | YP_002460586 |
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| Protein GI | 219670151 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1776] Chemotaxis protein CheC, inhibitor of MCP methylation
[COG1886] Flagellar motor switch/type III secretory pathway protein |
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| TIGRFAM ID | [TIGR02480] flagellar motor switch protein FliN |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTAACG GGATGCTTTC CCAGGAAGAA ATCGATGCCC TGCTGGGAGG GAATCAGCAA
ACGGATCCCC CAGCGCAAAA GGAACCGGCG GTAGAGTTCA GTGATATGGA AAGGGATGCT
ATAGGAGAAA TTGCCAATAT CTCCATGGGA ACAGCAGCCA CAACCCTGTC CCAGCTCTTA
GGAAAGAAAG TCGAAATTAC CACCCCTAAA GTGGATATGG CCAGTGCAGA GCAAATCCGC
AAGGATTATC CCATTCCTTC GGTGATCGTC GATGTCCGGT ATAAAGCGGG AATTGAAGGG
TCTAATCTTC TCATCCTTTC CCAACGGGAT GGAGCGGTTA TCGTGGATCT CATGATGGGA
GGAACAGGGG AGAACCCCCC GACAGAGCTT TCAGAGCTCA GCATCAGCGG CATCTCGGAA
GCCATGAACC AGATGATGGG TTCAGCGGCT ACCTCCATGT CCACCATGTT TAATTCTGTC
GTGGATATTA CACCACCCCA GCTCGTCTTG AATGATATGT CTCCCCAGGA TGACGACATT
ATTACCAACG TGCTTCAATC CCACGAAGAA CTGGTGCGGA TTTCTTTCCG GATGGTGGTG
GAGGATGTCA TTGACAGCAT TTTAGTTCAA GTGATTCCCA TTCATGTAGC GAAAGGAATG
GTTGGCAAGC TTCTGGGGAC CATGGGAGGA AGCGGTTCGA AACCGGAGCC CAAACCCGCC
CCTACCCCTA CTCCGGCTCC TTCCCTCCAG ATGGAACAGC CTCAGGCACC CGTCAGCGGC
TATGGGCAGC CAGCGGCACC GGCCCCCGGT CACTTTATGC CTCAGGCTCA GCCGGAATAT
CCTCCTCAGC AGCAGCAAGG GTATGGCGGG CCTGCTTATG GGCACAATCA AGGCGGTTAT
TATACTCCAG GCTATGGGGT TCCGCCTACA CCGGTACAAC CGGCCCAATT CGTTCCCTTA
AAGCCTGGTG ATCCCCTTCA TGGGCAGGAG AACCTCGAAC TTATCTTGGA TGTTCCTTTG
CAGGTCAGCG TGGAGTTAGG CAAAGCCAAG AAAACCATTA AGGAAATCCT TGAGTTGGGA
CCCGGCTCAG TCATTGAGCT GGATCGCCTG GCTGGAGAAC CGGTGGATAT GATTGTTAAC
GGTAAACTTA TCGCCAAATG TGAAGTCGTT GTCATCAATG AAACCTTTGG GATACGCATT
ACCGATATTG TACAGCCCGG TGAACGCATG ACAAAGGCCA TGGGGTTTCA ATAA
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| Protein sequence | MGNGMLSQEE IDALLGGNQQ TDPPAQKEPA VEFSDMERDA IGEIANISMG TAATTLSQLL
GKKVEITTPK VDMASAEQIR KDYPIPSVIV DVRYKAGIEG SNLLILSQRD GAVIVDLMMG
GTGENPPTEL SELSISGISE AMNQMMGSAA TSMSTMFNSV VDITPPQLVL NDMSPQDDDI
ITNVLQSHEE LVRISFRMVV EDVIDSILVQ VIPIHVAKGM VGKLLGTMGG SGSKPEPKPA
PTPTPAPSLQ MEQPQAPVSG YGQPAAPAPG HFMPQAQPEY PPQQQQGYGG PAYGHNQGGY
YTPGYGVPPT PVQPAQFVPL KPGDPLHGQE NLELILDVPL QVSVELGKAK KTIKEILELG
PGSVIELDRL AGEPVDMIVN GKLIAKCEVV VINETFGIRI TDIVQPGERM TKAMGFQ
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