Gene Dhaf_4136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_4136 
Symbol 
ID7261156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp4383948 
End bp4384730 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content48% 
IMG OID643564053 
Productflagellar biosynthetic protein FliR 
Protein accessionYP_002460581 
Protein GI219670146 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1684] Flagellar biosynthesis pathway, component FliR 
TIGRFAM ID[TIGR01400] flagellar biosynthetic protein FliR 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.140259 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCTTAG CAGAATTTTT GCAATGGAAT CTCACGCTGT TCCTCCTTAT TCTCTCACGT 
TGGGCAGGCA TGATTATGCT GGCTCCGGTG TTTGGAGCCC GCGGGGTTCC CGCCATGGTC
AAACTAGGCT TAGCGGTAAG CATTTCGATC ATCCTCTATC CGCTCATCAT GGCCGCCGGA
CCCCAGATTC CCAGCGAAAC ACTGCCCTAT GCAGCACTAC TAATCAAAGA AATTGTGGTT
GGCCTTGTGA TCGGCTTTGT CATTTATGCC ATCACTGCCG TATTAGAAGG GGCAGGTCAA
TTAATTGACA TGCAGATGGG CTTTAATATG AGCGGAGCCA TCGATCCGAT TTTTGGTGTG
CAAAGTGCGA TGATGGGTAA TTTTCAAATG ATTTTGGCCA TTATGCTCCT CCTGGCTACC
AACTCTCACC ATTATCTTAT TGCGGCTATG GTCAAGAGCT ATACTTATGT CCCGATCAAT
CCGGGGGCTC TCCCCCAAGG ACTTAATTAT TATATCTTTC TCATTCGGGA AATCTTCACC
TTATCCGTAC AATTGGCCCT CCCCGTCATC GGTGCGTTGG TTCTGACGGA TATCGGCGTG
GGGCTCTTGA TGCGCACCGT GCCCCAGATG AATATTTTTA CGGTTATCTT TCCCGTGAAG
ATCATCTTCG GTTTTACCAT TCTTTTTTTG GGAATCGGCT TTTTTGGCGA AACAGTCAAC
ATGCTTTTTG AGCGGGCCAT GACCTGGCTT TTAGAGCTGT ATAAAGGGTG GCAGGGAACA
TGA
 
Protein sequence
MGLAEFLQWN LTLFLLILSR WAGMIMLAPV FGARGVPAMV KLGLAVSISI ILYPLIMAAG 
PQIPSETLPY AALLIKEIVV GLVIGFVIYA ITAVLEGAGQ LIDMQMGFNM SGAIDPIFGV
QSAMMGNFQM ILAIMLLLAT NSHHYLIAAM VKSYTYVPIN PGALPQGLNY YIFLIREIFT
LSVQLALPVI GALVLTDIGV GLLMRTVPQM NIFTVIFPVK IIFGFTILFL GIGFFGETVN
MLFERAMTWL LELYKGWQGT