Gene Dhaf_4135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_4135 
Symbol 
ID7261155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand- 
Start bp4382899 
End bp4383951 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content49% 
IMG OID643564052 
Productflagellar biosynthetic protein FlhB 
Protein accessionYP_002460580 
Protein GI219670145 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1377] Flagellar biosynthesis pathway, component FlhB 
TIGRFAM ID[TIGR00328] flagellar biosynthetic protein FlhB 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0846766 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAAA AAACGTTTCA GGCCACGCCC AGGCGCAGGC AGGAAGCACG TAAGAAAGGC 
CAGGTTTTTA AGAGTACGGA AATGGTTTCC GCACTTATGC TGGTCAGTTT TATTGGGTTG 
TTAAAATTCT ATGTGCCTAC CATGCTGGAA AAGGTTAGCC AGATCTTTCC TTATGTCTAT 
GGGCTATCTG CAGAATGGAC GGCCCGCTCC GTTGCCAGTC TGATGGTGGA TCTTCTCTGG 
CTGGGCGTTC AAATTGTCGC TCCCTTGTTT GTGGTGGGGG CTGTCATCGC TACCGGTGCA 
AATTACCTTC AGGTACGCTC CCTGTTTACA TTGGAGCCTT TAAAACCCCA ACTGAGCCGG 
ATTAGTATGA TTAGCGGTGC TAAACGGATG TTTGGCATGA AAGCCTGGGT AGAGCTGATC 
AAATCCCTGC TCAAGGTCAC CTTTATCGGC TATTTTCTCT ACGCCACCAT CCGGGATAAT 
TTCGAAATCT TTCCGGTCAT GGCCCGTCTC ACGGTTGGCC AGGGGGCGAT GTTTATCGGC 
GGCTTAATCG TCGAATTGGG CTGGAAGATT GCTCTGTCCT TCTTCGTCAT TGCGGCCATC 
GATTTTCTCT ATCAGTGGTG GGATTATGAG AAAAATCTTA AGATGTCCCA CGAAGAGTTG 
AAGCAGGAAT ATAAGCAAAC GGAAGGGAAT CCTCAGCTTA AAGGGGAAAT TAAAAGAAAA 
CAAAGGGCTA TGTCCATGCG CCGCATGATG CAGGATTTAA AGACTGCCGA TGTGGTGGTG 
ACCAATCCCA CCCACTATGC TGTAGCCCTG CGCTATGATC CCAAGGAAAA TTCGGCCCCG 
GTGGTGGTGG CTAAAGGTGC CGATGAAATT GCCCAACGGA TTAAGCAACT TGCCAAAGAT 
TATGGCATCA TAACCATGGA AAATAAACCG CTGGCCCGGG CCCTTTTCGC TCAAGCGGAA 
ATCGGACAAG CCGTGCCTGC GGATCTCTAT AAAGCCGTGG CAGAGGTTCT CGCCTTTGTG 
TACCGGCTTA AGCGCAAGAA ATTTACCGGG TAA
 
Protein sequence
MSEKTFQATP RRRQEARKKG QVFKSTEMVS ALMLVSFIGL LKFYVPTMLE KVSQIFPYVY 
GLSAEWTARS VASLMVDLLW LGVQIVAPLF VVGAVIATGA NYLQVRSLFT LEPLKPQLSR 
ISMISGAKRM FGMKAWVELI KSLLKVTFIG YFLYATIRDN FEIFPVMARL TVGQGAMFIG 
GLIVELGWKI ALSFFVIAAI DFLYQWWDYE KNLKMSHEEL KQEYKQTEGN PQLKGEIKRK 
QRAMSMRRMM QDLKTADVVV TNPTHYAVAL RYDPKENSAP VVVAKGADEI AQRIKQLAKD 
YGIITMENKP LARALFAQAE IGQAVPADLY KAVAEVLAFV YRLKRKKFTG