Gene Dhaf_4131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_4131 
Symbol 
ID7261151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand- 
Start bp4378017 
End bp4378661 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content47% 
IMG OID643564048 
Producttype IV pilus assembly PilZ 
Protein accessionYP_002460576 
Protein GI219670141 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG5581] Predicted glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.00543164 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAATATC TTGATAAATT AGTTTCCGGA TTAGCTGTTG AGTTGCATGT TCCGGAAGGG 
GACTATGAAG GAAATTACAA GACACATGTC GATGAGATCG GCAAAACACG ACTATCTGTA 
TATGCACCCC ATTACCAAGG GATGATCATT CCCCTGCAGG AGGGTACTCT TGTGGAGGTT 
ACTTTTTGGG ATGACGTGGC TTCCTACTCT TTTATGTCAT CGGTTCTTCA GCGTGTCGCA 
ACACCCATAC CGATGTTTGT CCTGAAGATG CCGGATAGTA TTAGAAGGGT CCAAAGGAGG 
AACTATGTGC GGGTTTCCGC CTCCTTCCCG ATAACCTATC AAGTGGTGGA GAGGGAAGGA 
TTAGGGGACC TGCTGAAGGG GAATATGCTG GATCTGAGCG GCGGCGGAAT GCGTTTTCAG 
GCCAAGGTCA AGTTGGACAA AGGCTCCATC CTCTATGCCA ATCTTGAATT ACCCTGCGGT 
ATCATCGGAA CTCCGGGCCG GGTATGTCGG GTAGAGCCTA TTGAAGACAC CAAGTACTTT 
TCCGTGTCCG TAGATTTCTA TCAAATTTCT GAACGTGATC GCGATCGCAT CATCCGATGT 
GTTTTTGATA TTCAAAGAGA CTTGCGTAAG AAAGGATTGA TCTAA
 
Protein sequence
MQYLDKLVSG LAVELHVPEG DYEGNYKTHV DEIGKTRLSV YAPHYQGMII PLQEGTLVEV 
TFWDDVASYS FMSSVLQRVA TPIPMFVLKM PDSIRRVQRR NYVRVSASFP ITYQVVEREG 
LGDLLKGNML DLSGGGMRFQ AKVKLDKGSI LYANLELPCG IIGTPGRVCR VEPIEDTKYF 
SVSVDFYQIS ERDRDRIIRC VFDIQRDLRK KGLI