| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4127 |
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| Symbol | |
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| ID | 7261147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 4375778 |
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| End bp | 4376524 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 643564044 |
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| Product | RNA polymerase, sigma 28 subunit, FliA/WhiG |
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| Protein accession | YP_002460572 |
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| Protein GI | 219670137 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000000000536564 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGAATC CTTATGAAGC AGCCAATCGA GGTTCATGGA GAGTCGAGCA AATTGAAAAG
TATTTGCCGT TAGTCAAGCG TATCTCCGGT CGGTTGCTTA TTTCCTTACC TCAACATGTG
GATGAAGACG ATTTGATCGG CTACGGTGTG TTTGGATTGT TGGATGCCTT AGAGCGTTTT
GACCCTGTTC GGGGAGTGAA ATTTGAAACT TATGCTACGC TGAGAATCCG GGGAGCGATT
ATCGATGGTT TGCGGACGAT GGATTGGGTA CCTCATTCGG CACGGCAGAA AATCAAGCGC
ATCCAGGATG CCTTTGCCGA AGTGGAGGCA CGGCATGGCC GTCCTGCCAG CAATGAAGAG
GTAGCGGTTT TGCTGGAGAT GGAGCCGCGG GACTTGGAAG CTGCCCTGCA TCAAGGGCAA
ATGCTGACTT TGACCTCCCT TGATGAAGTG GCTGTAGGTG AGGAAGGGGA AGCCTATACC
CCCAGGACAC AATTGACGGA CCCCATAGCA CAGGAAGCTT TTCAGGAAGT TGAACTGGAT
GAGCAAAAAA AGATCCTGGC CGACGCTATC GAAAAGCTTC CTGAGAAGGA AAAACTGGTC
GTGGCCTTAT ATTATCAGGA AGACCTTACC CTGAAAGAAA TCGCTGTGAT TATGAAACTT
TCGGAATCAA GAATCTCCCA GCTTCATTCC CAAGCCATCC TGCGCCTAAG AGGCCGCCTC
AGCCGCCAAA AGAAGAATTT ATTCTAA
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| Protein sequence | MSNPYEAANR GSWRVEQIEK YLPLVKRISG RLLISLPQHV DEDDLIGYGV FGLLDALERF
DPVRGVKFET YATLRIRGAI IDGLRTMDWV PHSARQKIKR IQDAFAEVEA RHGRPASNEE
VAVLLEMEPR DLEAALHQGQ MLTLTSLDEV AVGEEGEAYT PRTQLTDPIA QEAFQEVELD
EQKKILADAI EKLPEKEKLV VALYYQEDLT LKEIAVIMKL SESRISQLHS QAILRLRGRL
SRQKKNLF
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