| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4119 |
|---|
| Symbol | |
|---|
| ID | 7261139 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 4368521 |
|---|
| End bp | 4369363 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 643564036 |
|---|
| Product | Lytic transglycosylase catalytic |
|---|
| Protein accession | YP_002460564 |
|---|
| Protein GI | 219670129 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000000000000767564 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAATACGG CAGAACTAGT GCTGCTTTAC CAGCTTCAAA GTATGAATCA GGCCTGGCAG
GATACTTCAA GGAGTGAGTC CGGAAACAAG GATGGCTCCC AAGCTCTCCT CTTTGCCACC
TTGCTCCAGT CCGCCCTTTC AGGAAATGAT GGCTCCAGCT CAGGATTAGC TTTGGAAGCT
TTTGCCGGAC AAGAATTAGG GTCCGGTTCT GAGCAAGAGT CGCAGTCAAC TGAGAATTCA
CAACTTCTTG CCGCAATGTT ACTGGGAAGT CTTTTTTCCG GAAAGGATTC TCTCTTATCT
GAAAATCTTC TCTCATCCAT GAGCCTTACC GGAATGGGGC AAAATTCATG GACCTCTTTG
ACCTCGGCAT ATAATCCTTA CTCCGGTATA GTAAACTCTC TCCAAGCAAA CTCCTTAAGT
TCTCAGCGGA GTTCAGATTA CCGTTCCGAT CAGCCGGCTA TAGAACAGCT TATCGCGGAA
GTAGGGCAGC GCCATGGGAT AGACACGAAT CTGATCCGGC AAGTGGTGAT GGCTGAATCC
AGTTTTAACC CCCATGCGGT ATCGTCAGCG GGAGCTATGG GTCTGATGCA GTTGATGCCT
GGTACGGCAA AGACTTATGG TGTGACCGAT CCTTTTGATC CGGCTCAGAA TCTTGATGGG
GGAACCCGTT TTTTAAAGGA TTTGTTAGTG CGGTTTAAAG GAAATGTCGC GTTTGCCTTA
GCGGGCTATA ATGCAGGCCC AGGGGCTGTA GATAAATACA ATGGGATTCC ACCTTACAAG
GAAACGCAGA ATTACGTGAA AAAAATACTT TCTGCATTAG GAAAAGTAGA TACACAAGCA
TAA
|
|---|
| Protein sequence | MNTAELVLLY QLQSMNQAWQ DTSRSESGNK DGSQALLFAT LLQSALSGND GSSSGLALEA
FAGQELGSGS EQESQSTENS QLLAAMLLGS LFSGKDSLLS ENLLSSMSLT GMGQNSWTSL
TSAYNPYSGI VNSLQANSLS SQRSSDYRSD QPAIEQLIAE VGQRHGIDTN LIRQVVMAES
SFNPHAVSSA GAMGLMQLMP GTAKTYGVTD PFDPAQNLDG GTRFLKDLLV RFKGNVAFAL
AGYNAGPGAV DKYNGIPPYK ETQNYVKKIL SALGKVDTQA
|
|---|
| |