| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4067 |
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| Symbol | |
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| ID | 7261087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 4315302 |
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| End bp | 4316750 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643563984 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase |
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| Protein accession | YP_002460512 |
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| Protein GI | 219670077 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGGGATA GCCAAAGGAT TGCCGATTTG GTCCGGGGGG AATTGACAGG TGATTCCCAG
GTCAGGGCTT CCGGCTGTTG TATCGACAGC CGGGGGGTCA AAGCAGGGGA GATCTTTTTT
GCCTTAGTGG GCGAGCGGAC GGACGGACAT GATTATATTG AGGGGGCCTG GCAGAAAGGC
GCCTCGGTGG TGATCGGGGA GAAGGAACGG TTGGAACACC GCCGGGAAGT CCGGGTTCCT
GAGGGCAAAG CCCTGATCCG GGTGGAGTCC GGCCTTGCCG CTATGCAGAC CTTGGCTCAG
GCCTGGCGTA AGGAGTTGGG GGCCAAAGTG GTGGCCATCA CAGGCAGCAA TGGGAAAACC
ACCACCAAAG ATATGGTAGC GGCGGTCTTA AGTGAAAAAT ACCGCACCCA TAAAAATTTA
GAGAACCAAA ACAATGAGTT GGGCCTTCCT ATGACTATTT TAAAGGCGAC CGAGAATACG
GAAGTTCTTA TTTTAGAGAT GGGCATGCGC GGATTGGGGC AAATTGCTTT TTTATGTGAT
ATAGCCTGCC CGGATATCGG TGTTATAACC AATATTGGCA CGACCCATAT GGAGCTTTTA
GGTTCACAAG AAGCTATTGC CCGGGCTAAG TGGGAGCTGA TTGAAGCCCT TCCTGAGACA
GGGAGCGCCG TCCTCAATGG GGAGGATGAG TGGAGTGTGA AGCAGGCTGA GCATGACTCA
CATCGGACCT TCTTCTATGG CCTGGAAGGG AGATTCCACG AGCCCGATCT GCGGGGAAGG
TCTCTGACAC CCTTCGGTAC TCTGGGAACC TGCTTTCAAG CGGAAATGGG ACACGGGGAC
AGGTCCCTTG TCCCACTAGG AGAAAAGCAA GCCGCTTCGT CGGTTACGGT TCGCCTGCCC
CTGCCGGGAG AGCATAATGT GCTGGATGCA CTGGCCGCCC TCAGTGTCGG GGTTCTCTTG
AATGTATCCC TGGAAGAGGG ATGCCGGGGG CTGGCTGCCA TGGAACTATC CAGGATGCGC
CTGGAGCTTC AACCGGGACC AGGGGGCAGC ACCTTAATCA GTGATGTCTA TAATGCCAAC
CCGACCTCGA TGAAGGCCTC CCTGCAGGTC TTAAAGGAAA GAGGGGGGGA GTCCACTCTT
GCCATACTGG GAGAAATGTA TGAACTGGGG CAATCCTGCC GGGCGGGGCA TTATGAAGTG
GGGCAGACGG TAGCCGACCT GGGAATCTCT GAACTGATCA CCGTTGGTCC GCTGGCTGAG
GAAATTGCTC GCGGAGCTTT GGAAAAGGGG TTATCACCCC AAAGGATTCA TTCTTTTCCT
GAGCGCGAGG GGGCGATCAA GAAAGCCCGG GAGTTGCTGG CAGGTTTAAA TCAAGGCACC
TGGGTCTTAA TCAAAGCTTC TCGTGGTATG AAAATGGAAG AAGTCACAAG GGCACTTCGC
AAAGATTAG
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| Protein sequence | MWDSQRIADL VRGELTGDSQ VRASGCCIDS RGVKAGEIFF ALVGERTDGH DYIEGAWQKG
ASVVIGEKER LEHRREVRVP EGKALIRVES GLAAMQTLAQ AWRKELGAKV VAITGSNGKT
TTKDMVAAVL SEKYRTHKNL ENQNNELGLP MTILKATENT EVLILEMGMR GLGQIAFLCD
IACPDIGVIT NIGTTHMELL GSQEAIARAK WELIEALPET GSAVLNGEDE WSVKQAEHDS
HRTFFYGLEG RFHEPDLRGR SLTPFGTLGT CFQAEMGHGD RSLVPLGEKQ AASSVTVRLP
LPGEHNVLDA LAALSVGVLL NVSLEEGCRG LAAMELSRMR LELQPGPGGS TLISDVYNAN
PTSMKASLQV LKERGGESTL AILGEMYELG QSCRAGHYEV GQTVADLGIS ELITVGPLAE
EIARGALEKG LSPQRIHSFP EREGAIKKAR ELLAGLNQGT WVLIKASRGM KMEEVTRALR
KD
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