| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4054 |
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| Symbol | |
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| ID | 7261074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 4301585 |
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| End bp | 4302334 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 643563972 |
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| Product | sporulation sigma factor SigE |
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| Protein accession | YP_002460500 |
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| Protein GI | 219670065 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02835] RNA polymerase sigma-E factor
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00000000091924 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGAAGGA TAGTAGAGCA TATCAAACTG ATAGTGGAAC ATATCAAGTT ATGGGCCGTA
AAAATCAAAT CAAAACTGAT AAGCAAGTTT ACCGACTGGC GGGAAATTTA TTATGTAGGG
AGCAGTGAAG CTCTCCCTCC TCCCTTAAGC ACGGATGAGG AAGGAGAGCT GTTGGAACGC
CTGGAGCGGG GGGATGTGAG TGTCCGGGAT GTTCTGATTG AACGAAATTT GCGGCTGGTG
GTCTATATTG CCCGCAAGTT CGAAAATACG GGAGTCGGTA TCGAGGATCT TGTCTCCATT
GGCACGATTG GGCTGATCAA GGCTGTCAAT ACCTTTGATC CTCAGAAAAA GATCAAACTG
GCAACCTATG CTTCACGTTG TATTGAAAAT GAAATCCTGA TGCATTTGCG CCGCAACAAT
AAAACGAGAA CCGAGGTATC CTTCGATGAG CCTTTAAATA TTGATTGGGA TGGTAATGAG
CTCCTGCTTT CCGATGTCCT GGGCACGGAA AACGATATTA TTTCCCGTCC TTTGGAGGAA
AAGGTGGATC GCCAGCTTTT GCATTTAGCG ATGGCCAGGC TGACGGATCG TGAAAAACTG
ATTATGGAAT TGCGCTTTGG TTTGGATAAT GGAGAAGAAA AAACCCAGAA GGAAGTTGCC
GATCGGCTGG GTATATCCCA ATCCTATATT TCGCGGCTGG AAAAGCGGAT TATCCGCCGT
TTGCGGAAAG AATTTATCCG TTTGGAATAA
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| Protein sequence | MRRIVEHIKL IVEHIKLWAV KIKSKLISKF TDWREIYYVG SSEALPPPLS TDEEGELLER
LERGDVSVRD VLIERNLRLV VYIARKFENT GVGIEDLVSI GTIGLIKAVN TFDPQKKIKL
ATYASRCIEN EILMHLRRNN KTRTEVSFDE PLNIDWDGNE LLLSDVLGTE NDIISRPLEE
KVDRQLLHLA MARLTDREKL IMELRFGLDN GEEKTQKEVA DRLGISQSYI SRLEKRIIRR
LRKEFIRLE
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