Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_3931 |
Symbol | |
ID | 7260952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 4166529 |
End bp | 4167524 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 643563854 |
Product | CRISPR-associated protein Cas1 |
Protein accession | YP_002460382 |
Protein GI | 219669947 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1 [TIGR03641] CRISPR-associated endonuclease Cas1, HMARI/TNEAP subtype |
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Plasmid Coverage information |
Num covering plasmid clones | 55 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAAAAA CCTTATATAT CTTCTCCAAT GGTCAGCTCC GGCGGAAGGA TGATACGATT TTCTTCGTCA ATGAGGAGGG GGATCAAAAA TATATCCCTG TGGAAGATAC CTCCGAGTTG ATGGTCTTTG GGGAGGTGGA TATTAATAAA CGATTCCTGG AGTTCTGCAC GCAAAAGGAG ATTATCATTC ATTACTTTAA TAACTATGGT TATTACAGCG GTACCTTTTA TCCCCGGGAA CACTATAACT CAGGGTATAT GATATTGAAG CAGGCTGAAG CTTACCTGAA TGAGGAAAGA AGGCTGTTGC TGGCGCGGCA ATTTGTGAAC GGTGCTTTTT TAAATATCAG GCAGGTTCTT AAATACTATG CCAATCGGGG CAAGGAAGTG GGGCCCCGGT TAACGGAGAT AGAAAAGCTG AGTGAAGGTA TAGGAGCTGC CGGCACGATT CCTGAGCTGA TGGCTTTTGA AGGGAATATC AGGGAACATT ATTATAAGGC CTTTGACGCG ATTCATGGCC ACCCGGAATT TGTGTTCGAG GGGCGCTCAA AGCGGCCTCC TAAAAATGCA ATGAATACCT TGATCAGTTT TGGCAATTCC ATTGTATACT CCACAGTGTT GAGTGAAATT TATAAAACTC ATCTGGATCC GCGCATCGGC TATCTTCATA CCACTAATTT TCGCCGGTTT AGTTTGAATT TGGATGTGGC GGAAATCTTT AAACCGATTT TGGTGGATCG GGTGATTTTT ACTCTGATCG GGAAAAAGAT GATCAAAAAG AGCGATTTTA AAAAGGAGTC CGGGGGCTTA ATGCTGAAGG AGAACGGACG GAGGGTTTTC GTTGAGGAGC TGGAAAACCG TTTGAAAACC ACCATCAACC ACCGGGATAT AGGCACTCCG GTGTCTTATC GGCGCTTGCT TCGTCTTGAG CTGTACAAGC TGGAAAAGCA TCTCATGGGT GAGAAAGACT ACGAGCCTTT TGTCAGCCAG TGGTGA
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Protein sequence | MKKTLYIFSN GQLRRKDDTI FFVNEEGDQK YIPVEDTSEL MVFGEVDINK RFLEFCTQKE IIIHYFNNYG YYSGTFYPRE HYNSGYMILK QAEAYLNEER RLLLARQFVN GAFLNIRQVL KYYANRGKEV GPRLTEIEKL SEGIGAAGTI PELMAFEGNI REHYYKAFDA IHGHPEFVFE GRSKRPPKNA MNTLISFGNS IVYSTVLSEI YKTHLDPRIG YLHTTNFRRF SLNLDVAEIF KPILVDRVIF TLIGKKMIKK SDFKKESGGL MLKENGRRVF VEELENRLKT TINHRDIGTP VSYRRLLRLE LYKLEKHLMG EKDYEPFVSQ W
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