| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3915 |
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| Symbol | |
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| ID | 7260936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 4150399 |
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| End bp | 4153140 |
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| Gene Length | 2742 bp |
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| Protein Length | 913 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643563838 |
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| Product | ATPase, P-type (transporting), HAD superfamily, subfamily IC |
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| Protein accession | YP_002460366 |
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| Protein GI | 219669931 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0474] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01116] sarco/endoplasmic reticulum calcium-translocating P-type ATPase
[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01517] plasma-membrane calcium-translocating P-type ATPase
[TIGR01523] potassium and/or sodium efflux P-type ATPase, fungal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGCAGC AAGCATGGCA TGTTTTGCCC TGGCTGGATG TGGTTAAGGC TTTGGAGGTG
CATCCTGGCA AAGGGTTAAA CCTGAAGGAG GTTAACCGGC GGCTGGGCGA AGTGGGGAGA
AACATTCTGG AGACCAAAAA AGGGGTTCAT CCGGTCTTTC TCTTTCTCGG ACAATTCAAG
GATTTTATGG TCTTGGTTCT TTTGGCTGCG ACCATCGTTT CCGCACTCTT AGGGGAAATC
GCCGATGCCG TAACGATTAT GGCCATCCTG GTTCTGAATG CAGTCCTGGG CTTTATCCAG
GAATTCCGGG CGGAGCGCTC TATTGAATCC TTAAAATCCT TAACGGCCCC GGAAGCCCGG
GTCTTGCGGG ATGGCCTGGA AAGCAGGATT CCCGCAGCGG ACCTTGTTCC GGGAGATATC
GTTCTCCTGG AGGCCGGGGA TCGGATTCCT GCCGACATCC GCTGGATTCA GGCCGTGAAT
GTGGAAGTGG AGGAATCCGC TTTGACCGGT GAATCCCACC CGGTGGCCAA GCGGTTGGCT
CCTTTGACCG ATGAGCTGAC CCCCATGGCT GATCGGGTGA ATATGGGGTA TATGGGTACC
TCCTTAGTCG GCGGCCGCGG GGCCGGGGTC GTGGTGGCCA CGGGAATGGA GACGGAAATG
GGCGTTATTG CCGGCATGAT CCAGAGTGTG GAGGAGGAAG AGACCCCTCT GCAAAAGCGC
CTGGCCCAAC TGGGCAAATA TTTGGTCATT ATCAGTATTA TCGTCTGCGG TATTGTAGTC
CTGACCGGGG TTCTGCGGGG GGAAGGCTTC TATAAGATGT TCCTGGCCGG GGTCTCCCTG
GCTGTGGCGG CCATTCCGGA AGGGTTGCCG GCTATCGTTA CCGTAGCCCT GGCCATCGGG
GTGCAAAGAA TGGTGAAGCG CAAAGCCATC ATCCGCAAGC TCCCTGCTGT GGAGACCCTG
GGTTGTGCCA CAGTCATCTG TTCCGATAAA ACCGGGACCC TCACTCAAAA TGAAATGACC
GTACGGCAAA TCTATACGGA TCGCACAATG GTTGCCGTAA CCGGACAGGG CTATGATCCT
AAAGGGGACT TCCATGGGGC GGATCCCACC AAGGAAAAAG GCCCCTTACA GTCAGCTTTG
AAAATTGCTT CCCTGTGCAA TAATTCCTCC CTGACCCGCA AGGGGGTGCA GGTGGCGGGA
ATGTTCCGGG CCGCGGGCAA GGATTCTCCC TGGGGAATCG AGGGAGACCC TACGGAGGGC
GCTCTGCTGG TTGCCGCCGC CAAGGCGGGA ATCTGGCGGG AAACCCTGGA GCGCAAGGAA
GAGCGGGTTG GGGAAATTCC CTTTGACTCG GATCGCAAGC GCATGAGCGT GATCTATAAA
GGCAAACGGG AAAAGAAGGC CTATGTCAAG GGAGCTCCTG ATGAGATCCT TAGGCGCTGC
CGCCATGAGC TGACTTCCGA AGGCATTGTG GAATTGAACG AGCTGAGAAG AAGGGCTATT
CTGAGGGCCA ATGATGAGAT GGCTAAAAAA GCTTTAAGGG TTCTGGCCTT AGCCGAGAAA
CCCTTGCAGG AAAACGAGCG GATTGACGAA CGGGTAGAGG AAGATTTGAC TTTCGTAGGG
CTTATGGGGA TGATTGACCC GCCCCGGGCC AGCGCGGCCA AAGCGATCAA AGTGTGCCGA
AGAGCCGGCA TCAAGCCGGT GATGATCACA GGGGATCACC GTCTCACAGC AGAGGCTGTG
GCCCGGGAAC TGGGAATTCT CAAAGGCAAT GGCGACGGCA TACTGACCGG CTCCGATCTG
GACCGGATGT CCGATGAAGC GCTGGAAAAG GAAGTCATGA ATATCTCCGT CTACGCCCGG
GTCACCCCCA AGGATAAGCT CAGGATCGTC CGCGCCCTCA AGAAGAACGA TCAAGTGGTG
GCCATGACGG GGGACGGAGT CAATGATGCC CCCGCCGTCA AAGAGGCGGA TATCGGGATC
TCCATGGGCA AGACGGGGAC CGACGTCACC AAAGAAGCCT CGGCCATGGT CCTGGCCGAC
GATAATTTCG CCACTATTGT GGCCGCCGTG GAAGAGGGCC GGGCCATCTA CGATAATATC
CGCAAGTTTA TCCGTTACCT GCTCTCCTGC AATATCGGTG AAGTTCTGGT CATGTTCCTG
GCCGCTTTGG TAGGGTTGCC CTTGCCCTTG CTGGCTATCC AGATTCTCTG GGTTAACCTG
GTGACCGATG GTTTGCCGGC CATGGCTTTG GGTGTGGACG GCATGGATAA AGATATTATG
AACCGCAAGC CGCGGGAACC CGGGGAGAGT ATCTTTGCCC GGGGGTTGGC ACGGAAGATC
ATGGTCCGCG GTCTGATCAT TGGCTTAGGC TCCCTGCTGG TATTTGTGAC TGCCATGTTC
TTGGGAGTGA ATATGCTGGC GGCCCGGACC ATGGCCTTTA CCACCTTGGT ATTCTCCCAG
CTCTTCCATG TCTTTGACTG CAAATCGGAA ACCCGGGGCA TTTTTGAGGT GGGAATCTTC
TCTAATCCTT ATCTGGTAGC GGCAGTGATC GGCTCCACCC TGATGCAGCT CAGTGTCATT
TACCTCCCGC CTCTCCAGGC CATTTTTAAA ACCACACCTT TAATGGGCTG GCAATGGGCA
TTGATCTTAG CGGTAGCCGG CGGTCCTTCC ATTTTGATTG GCTTATACCG TTTAGTCCGC
AATACCTGGC GGGGCAAAGA AATCATGGTG GGTGGAAAAT AG
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| Protein sequence | MRQQAWHVLP WLDVVKALEV HPGKGLNLKE VNRRLGEVGR NILETKKGVH PVFLFLGQFK
DFMVLVLLAA TIVSALLGEI ADAVTIMAIL VLNAVLGFIQ EFRAERSIES LKSLTAPEAR
VLRDGLESRI PAADLVPGDI VLLEAGDRIP ADIRWIQAVN VEVEESALTG ESHPVAKRLA
PLTDELTPMA DRVNMGYMGT SLVGGRGAGV VVATGMETEM GVIAGMIQSV EEEETPLQKR
LAQLGKYLVI ISIIVCGIVV LTGVLRGEGF YKMFLAGVSL AVAAIPEGLP AIVTVALAIG
VQRMVKRKAI IRKLPAVETL GCATVICSDK TGTLTQNEMT VRQIYTDRTM VAVTGQGYDP
KGDFHGADPT KEKGPLQSAL KIASLCNNSS LTRKGVQVAG MFRAAGKDSP WGIEGDPTEG
ALLVAAAKAG IWRETLERKE ERVGEIPFDS DRKRMSVIYK GKREKKAYVK GAPDEILRRC
RHELTSEGIV ELNELRRRAI LRANDEMAKK ALRVLALAEK PLQENERIDE RVEEDLTFVG
LMGMIDPPRA SAAKAIKVCR RAGIKPVMIT GDHRLTAEAV ARELGILKGN GDGILTGSDL
DRMSDEALEK EVMNISVYAR VTPKDKLRIV RALKKNDQVV AMTGDGVNDA PAVKEADIGI
SMGKTGTDVT KEASAMVLAD DNFATIVAAV EEGRAIYDNI RKFIRYLLSC NIGEVLVMFL
AALVGLPLPL LAIQILWVNL VTDGLPAMAL GVDGMDKDIM NRKPREPGES IFARGLARKI
MVRGLIIGLG SLLVFVTAMF LGVNMLAART MAFTTLVFSQ LFHVFDCKSE TRGIFEVGIF
SNPYLVAAVI GSTLMQLSVI YLPPLQAIFK TTPLMGWQWA LILAVAGGPS ILIGLYRLVR
NTWRGKEIMV GGK
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